RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 ZNF713Q8N859 430 aaPredicted RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 MB21D1Q8N884 522 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ARL10Q8N8L6 244 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRIML1Q8N9V2 468 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 BOLLQ8N9W6 283 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ATP11CQ8NB49 1132 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 KREMEN2Q8NCW0 462 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 APPL2Q8NEU8 664 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TOR1AIP2Q8NFQ8 470 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 OR14C36Q8NHC7 312 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 IL17DQ8TAD2 202 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CYP2W1Q8TAV3 490 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 KLHDC4Q8TBB5 520 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SPPL3Q8TCT6 385 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ACTRT2Q8TDY3 377 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SSH3Q8TE77 659 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF384Q8TF68 577 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 HASPINQ8TF76 798 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TBC1D22AQ8WUA7 517 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 UCMAQ8WVF2 138 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 IPCEF1Q8WWN9 437 aaPredicted RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CLEC4DQ8WXI8 215 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ASB12Q8WXK4 309 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 LARP4BQ92615 738 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 RUBCNQ92622 972 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ANKS1AQ92625 1134 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TFAP2CQ92754 450 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 DPF3Q92784 378 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SECISBP2LQ93073 1101 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 FATE1Q969F0 183 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 RPL36ALQ969Q0 106 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 HDAC10Q969S8 669 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF566Q969W8 418 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCDC47Q96A33 483 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 KIAA1191Q96A73 305 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 NSUN4Q96CB9 384 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 HVCN1Q96D96 273 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 EID2BQ96D98 161 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 MTFMTQ96DP5 389 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 APIPQ96GX9 242 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCDC34Q96HJ3 373 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SUCLG2Q96I99 432 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 BOD1Q96IK1 185 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 FEM1CQ96JP0 617 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PGBD1Q96JS3 809 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 MAELQ96JY0 434 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZFYVE19Q96K21 471 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 MSLNLQ96KJ4 702 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 FAM167AQ96KS9 214 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SPATA17Q96L03 361 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 RPL10LQ96L21 214 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 C7orf26Q96N11 449 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 UROC1Q96N76 676 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 NT5C1BQ96P26 610 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ASB2Q96Q27 587 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 IWS1Q96ST2 819 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PNKPQ96T60 521 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 EYA3Q99504 573 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 MPHOSPH8Q99549 860 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ELF4Q99607 663 aaPredicted RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 BARD1Q99728 777 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLF1Q9BQI6 1058 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SDF4Q9BRK5 362 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PYM1Q9BRP8 204 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CHCHD6Q9BRQ6 235 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ADPGKQ9BRR6 497 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TMEM79Q9BSE2 394 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 FAM167BQ9BTA0 163 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ANP32EQ9BTT0 268 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 NDC1Q9BTX1 674 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CNPPD1Q9BV87 410 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SSBP3Q9BWW4 388 aaPredicted RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SORBS1Q9BX66 1292 aaKnown RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 LGR4Q9BXB1 951 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 B3GNT5Q9BYG0 378 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 STK33Q9BYT3 514 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SENP6Q9GZR1 1112 aaPredicted RBP0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 KIAA1683Q9H0B3 1180 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 MAGEH1Q9H213 219 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 KCNH6Q9H252 994 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PDCL3Q9H2J4 239 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SERHL2Q9H4I8 314 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 CXorf56Q9H5V9 222 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 MANSC1Q9H8J5 431 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 BRD9Q9H8M2 597 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 IPPKQ9H8X2 491 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 DBNDD1Q9H9R9 158 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF287Q9HBT7 754 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TMEM8AQ9HCN3 771 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PREBQ9HCU5 417 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PNPLA8Q9NP80 782 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLC39A2Q9NP94 309 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SAYSD1Q9NPB0 183 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 AKIP1Q9NQ31 210 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 SERHLQ9NQF3 203 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 DMRT3Q9NQL9 472 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ITM2CQ9NQX7 267 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 PLSCR4Q9NRQ2 329 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 TM7SF3Q9NS93 570 aa0.65□□□□□ -2.31
RNU4-54P-201ENST00000516428 ST6GALNAC1Q9NSC7 600 aaPredicted RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms