RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 GREB1Q4ZG55 1949 aa16.88■□□□□ 0.29
DDX41-214ENST00000512334 MYH10P35580 1976 aa16.88■□□□□ 0.29
DDX41-214ENST00000512334 OBSL1O75147 1896 aa16.87■□□□□ 0.29
DDX41-214ENST00000512334 NUP210Q8TEM1 1887 aaPredicted RBP16.87■□□□□ 0.29
DDX41-214ENST00000512334 KRBA1A5PL33 1030 aa16.87■□□□□ 0.29
DDX41-214ENST00000512334 PRAMEF12O95522 483 aa16.87■□□□□ 0.29
DDX41-214ENST00000512334 TBXAS1P24557 533 aaPredicted RBP16.87■□□□□ 0.29
DDX41-214ENST00000512334 ERCC5P28715 1186 aaPredicted RBP16.87■□□□□ 0.29
DDX41-214ENST00000512334 GDI1P31150 447 aa16.87■□□□□ 0.29
DDX41-214ENST00000512334 MTIF2P46199 727 aaKnown RBP16.87■□□□□ 0.29
DDX41-214ENST00000512334 MAP3K7CLP57077 242 aa16.87■□□□□ 0.29
DDX41-214ENST00000512334 MFSD6LQ8IWD5 586 aa16.87■□□□□ 0.29
DDX41-214ENST00000512334 CMTM8Q8IZV2 173 aa16.87■□□□□ 0.29
DDX41-214ENST00000512334 NUP93Q8N1F7 819 aa16.87■□□□□ 0.29
DDX41-214ENST00000512334 TMEM176AQ96HP8 235 aa16.87■□□□□ 0.29
DDX41-214ENST00000512334 HNRNPABQ99729 332 aaKnown RBP16.87■□□□□ 0.29
DDX41-214ENST00000512334 TRPM5Q9NZQ8 1165 aa16.87■□□□□ 0.29
DDX41-214ENST00000512334 HCN4Q9Y3Q4 1203 aa16.87■□□□□ 0.29
DDX41-214ENST00000512334 DENND4CQ5VZ89 1909 aa16.87■□□□□ 0.29
DDX41-214ENST00000512334 NCANO14594 1321 aa16.87■□□□□ 0.29
DDX41-214ENST00000512334 ZNF638Q14966 1978 aaKnown RBP16.86■□□□□ 0.29
DDX41-214ENST00000512334 ZNF263O14978 683 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 RTN3O95197 1032 aaPredicted RBP16.86■□□□□ 0.29
DDX41-214ENST00000512334 ABL1P00519 1130 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 YWHAQP27348 245 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 SLC5A3P53794 718 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 TAF10Q12962 218 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 SASS6Q6UVJ0 657 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 MON1AQ86VX9 555 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 FAM114A1Q8IWE2 563 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 PPM1KQ8N3J5 372 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 FBXO32Q969P5 355 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 JAKMIP2Q96AA8 810 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 RSPRY1Q96DX4 576 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 SLITRK1Q96PX8 696 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 SMOQ99835 787 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 TTLL2Q9BWV7 592 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 THAP9Q9H5L6 903 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 FAM124BQ9H5Z6 455 aaPredicted RBP16.86■□□□□ 0.29
DDX41-214ENST00000512334 RAPGEFL1Q9UHV5 662 aa16.86■□□□□ 0.29
DDX41-214ENST00000512334 TRAV19A0A0A6YYK7 116 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 C2orf78A6NCI8 922 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 BEST1O76090 585 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 WEE1P30291 646 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 RAD23BP54727 409 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 VCPP55072 806 aaKnown RBP16.85■□□□□ 0.29
DDX41-214ENST00000512334 MLF2Q15773 248 aaPredicted RBP16.85■□□□□ 0.29
DDX41-214ENST00000512334 SLC44A4Q53GD3 710 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 HSP90AA4PQ58FG1 418 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 CCDC183Q5T5S1 534 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 PPP1R26Q5T8A7 1209 aaPredicted RBP16.85■□□□□ 0.29
DDX41-214ENST00000512334 IER5LQ5T953 404 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 RBM43Q6ZSC3 357 aaKnown RBP16.85■□□□□ 0.29
DDX41-214ENST00000512334 CELF5Q8N6W0 485 aaKnown RBP16.85■□□□□ 0.29
DDX41-214ENST00000512334 SLC4A11Q8NBS3 891 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 EHBP1Q8NDI1 1231 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 TTC16Q8NEE8 873 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 ZMIZ2Q8NF64 920 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 BPIFB1Q8TDL5 484 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 IRF7Q92985 503 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 SHDQ96IW2 340 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 INTS2Q9H0H0 1204 aaKnown RBP16.85■□□□□ 0.29
DDX41-214ENST00000512334 TBC1D17Q9HA65 648 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 OBP2AQ9NY56 170 aa16.85■□□□□ 0.29
DDX41-214ENST00000512334 SOBPA7XYQ1 873 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 CKMP06732 381 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 USP17L7P0C7H9 530 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 AVPR2P30518 371 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 PPP3CCP48454 512 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 CT47A1Q5JQC4 288 aaPredicted RBP16.84■□□□□ 0.29
DDX41-214ENST00000512334 ASTLQ6HA08 431 aaPredicted RBP16.84■□□□□ 0.29
DDX41-214ENST00000512334 CLEC20AQ6ZU45 233 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 RRAGAQ7L523 313 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 IRF2BP1Q8IU81 584 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 ARL14EPQ8N8R7 260 aaPredicted RBP16.84■□□□□ 0.29
DDX41-214ENST00000512334 SCAMP5Q8TAC9 235 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 LMO3Q8TAP4 145 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 CSGALNACT1Q8TDX6 532 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 CYP2S1Q96SQ9 504 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 CSNK1G1Q9HCP0 422 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 HEBP1Q9NRV9 189 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 TDP1Q9NUW8 608 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 GCNT4Q9P109 453 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 CCL26Q9Y258 94 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 PCDHB4Q9Y5E5 795 aa16.84■□□□□ 0.29
DDX41-214ENST00000512334 ZNF840PA6NDX5 716 aa16.83■□□□□ 0.28
DDX41-214ENST00000512334 TNFRSF10BO14763 440 aa16.83■□□□□ 0.28
DDX41-214ENST00000512334 CHADO15335 359 aa16.83■□□□□ 0.28
DDX41-214ENST00000512334 CD19P15391 556 aa16.83■□□□□ 0.28
DDX41-214ENST00000512334 NPR3P17342 541 aa16.83■□□□□ 0.28
DDX41-214ENST00000512334 HDCP19113 662 aa16.83■□□□□ 0.28
DDX41-214ENST00000512334 PDE6CP51160 858 aa16.83■□□□□ 0.28
DDX41-214ENST00000512334 PRKCQQ04759 706 aa16.83■□□□□ 0.28
DDX41-214ENST00000512334 FCHO2Q0JRZ9 810 aa16.83■□□□□ 0.28
DDX41-214ENST00000512334 CWF19L1Q69YN2 538 aaKnown RBP16.83■□□□□ 0.28
DDX41-214ENST00000512334 TMEM270Q6UE05 265 aa16.83■□□□□ 0.28
DDX41-214ENST00000512334 TPRG1Q6ZUI0 275 aa16.83■□□□□ 0.28
DDX41-214ENST00000512334 ARHGEF19Q8IW93 802 aa16.83■□□□□ 0.28
DDX41-214ENST00000512334 PDZD8Q8NEN9 1154 aa16.83■□□□□ 0.28
DDX41-214ENST00000512334 DNASE1L2Q92874 299 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms