RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ZNF131P52739 623 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 BYSLQ13895 437 aaKnown RBP10.09□□□□□ -0.79
NEDD9-211ENST00000508546 HNRNPDQ14103 355 aaKnown RBP10.09□□□□□ -0.79
NEDD9-211ENST00000508546 KCNB1Q14721 858 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 ZRSR1Q15695 479 aaKnown RBP10.09□□□□□ -0.79
NEDD9-211ENST00000508546 DDR2Q16832 855 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 ZNF423Q2M1K9 1284 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 CFAP221Q4G0U5 840 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 SDHAF4Q5VUM1 108 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 ZNF605Q86T29 641 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 NT5DC4Q86YG4 428 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 ZNF843Q8N446 348 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 CCDC33Q8N5R6 958 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 ARL14EPQ8N8R7 260 aaPredicted RBP10.09□□□□□ -0.79
NEDD9-211ENST00000508546 FSIP1Q8NA03 581 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 SPATA18Q8TC71 538 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 ZNF560Q96MR9 790 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 PKMYT1Q99640 499 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 REEP2Q9BRK0 252 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 LINC00597Q9H2U6 94 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 PARVGQ9HBI0 331 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 TRPC7Q9HCX4 862 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.09□□□□□ -0.79
NEDD9-211ENST00000508546 PILRBQ9UKJ0 227 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 STYXL1Q9Y6J8 313 aa10.09□□□□□ -0.79
NEDD9-211ENST00000508546 A0A0A0MRY4 1105 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 C2orf78A6NCI8 922 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 ANTXRLA6NF34 631 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 J3QKU1 62 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 K7ENM7 598 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 MAP3K13O43283 966 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 SLC26A4O43511 780 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 HDCP19113 662 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 EIF2DP41214 584 aaKnown RBP10.08□□□□□ -0.8
NEDD9-211ENST00000508546 SEC13P55735 322 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 GTF2BQ00403 316 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 DUOXA1Q1HG43 343 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 MAP7D1Q3KQU3 841 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 TMEM119Q4V9L6 283 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 ZC2HC1CQ53FD0 456 aaPredicted RBP10.08□□□□□ -0.8
NEDD9-211ENST00000508546 INTS6LQ5JSJ4 861 aaKnown RBP10.08□□□□□ -0.8
NEDD9-211ENST00000508546 LYSMD4Q5XG99 296 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 SLFN12LQ6IEE8 588 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 CCDC83Q8IWF9 413 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 TMEFF1Q8IYR6 380 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 TMEM86AQ8N2M4 240 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 PDCL2Q8N4E4 241 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 HDDC3Q8N4P3 179 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 MYCT1Q8N699 235 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 IL17RCQ8NAC3 791 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 TTC16Q8NEE8 873 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 CEP76Q8TAP6 659 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 LRRC15Q8TF66 581 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 RLN3Q8WXF3 142 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 FUBP3Q96I24 572 aaKnown RBP eCLIP10.08□□□□□ -0.8
NEDD9-211ENST00000508546 CDK5RAP3Q96JB5 506 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 FIZ1Q96SL8 496 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 POLMQ9NP87 494 aaPredicted RBP10.08□□□□□ -0.8
NEDD9-211ENST00000508546 MBD1Q9UIS9 605 aaPredicted RBP10.08□□□□□ -0.8
NEDD9-211ENST00000508546 AGO2Q9UKV8 859 aaKnown RBP10.08□□□□□ -0.8
NEDD9-211ENST00000508546 SLC6A14Q9UN76 642 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 LIMCH1Q9UPQ0 1083 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 PTPRQQ9UMZ3 2332 aa10.08□□□□□ -0.8
NEDD9-211ENST00000508546 CABIN1Q9Y6J0 2220 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 KNL1Q8NG31 2342 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 MUC22E2RYF6 1773 aaPredicted RBP10.07□□□□□ -0.8
NEDD9-211ENST00000508546 MYMKA6NI61 221 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 ANKRD63C9JTQ0 380 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 SGK1O00141 431 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 TK2O00142 265 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 ATXN7O15265 892 aaPredicted RBP10.07□□□□□ -0.8
NEDD9-211ENST00000508546 TRAK2O60296 914 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 HUS1O60921 280 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 FAM13AO94988 1023 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 IL18RAPO95256 599 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 KLF8O95600 359 aaPredicted RBP10.07□□□□□ -0.8
NEDD9-211ENST00000508546 CYP17A1P05093 508 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 SERPINF2P08697 491 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 MAGEA11P43364 429 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 KIR2DL1P43626 348 aaPredicted RBP10.07□□□□□ -0.8
NEDD9-211ENST00000508546 ATXN3P54252 364 aaPredicted RBP10.07□□□□□ -0.8
NEDD9-211ENST00000508546 ZXDBP98169 803 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 ATP2C1P98194 919 aaPredicted RBP10.07□□□□□ -0.8
NEDD9-211ENST00000508546 MYL7Q01449 175 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 EOGTQ5NDL2 527 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 ADALQ6DHV7 355 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 CRELD2Q6UXH1 353 aaPredicted RBP10.07□□□□□ -0.8
NEDD9-211ENST00000508546 ARMCX6Q7L4S7 300 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 RABEPKQ7Z6M1 372 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 TTC30AQ86WT1 665 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 ADGRG2Q8IZP9 1017 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 ALLCQ8N6M5 410 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 FRMD1Q8N878 549 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 FAM184AQ8NB25 1140 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 TXNDC5Q8NBS9 432 aaKnown RBP10.07□□□□□ -0.8
NEDD9-211ENST00000508546 CEP295NLQ96MC4 621 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 PNKPQ96T60 521 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 PLIN2Q99541 437 aa10.07□□□□□ -0.8
NEDD9-211ENST00000508546 ST6GALNAC4Q9H4F1 302 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms