RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 CREB3O43889 395 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 CCNFP41002 786 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 FAM98CQ17RN3 349 aaKnown RBP18.55■□□□□ 0.56
NUP54-205ENST00000507257 HSF5Q4G112 596 aaPredicted RBP18.55■□□□□ 0.56
NUP54-205ENST00000507257 TDRD10Q5VZ19 366 aaKnown RBP18.55■□□□□ 0.56
NUP54-205ENST00000507257 ALYREFQ86V81 257 aaKnown RBP18.55■□□□□ 0.56
NUP54-205ENST00000507257 PDSS2Q86YH6 399 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 PASD1Q8IV76 773 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 MTBPQ96DY7 904 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 ZNF518BQ9C0D4 1074 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 ALG13Q9NP73 1137 aaKnown RBP18.55■□□□□ 0.56
NUP54-205ENST00000507257 ARMCX1Q9P291 453 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 SERPINA10Q9UK55 444 aa18.55■□□□□ 0.56
NUP54-205ENST00000507257 TMEM63AO94886 807 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 SERPINA6P08185 405 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 PYGBP11216 843 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 GAD2Q05329 585 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 UGCGQ16739 394 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 DOK7Q18PE1 504 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 WDR78Q5VTH9 848 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 TTC39BQ5VTQ0 682 aaPredicted RBP18.54■□□□□ 0.56
NUP54-205ENST00000507257 TMEM270Q6UE05 265 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 THNSL1Q8IYQ7 743 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 ACTL9Q8TC94 416 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 FAM172AQ8WUF8 416 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 ELMO3Q96BJ8 720 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 FAM213AQ9BRX8 229 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 FRMD8Q9BZ67 464 aaPredicted RBP18.54■□□□□ 0.56
NUP54-205ENST00000507257 PHF24Q9UPV7 400 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 PLLPQ9Y342 182 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 ARID2Q68CP9 1835 aa18.54■□□□□ 0.56
NUP54-205ENST00000507257 TCRBV9S1A1TA0A576 114 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 WDR64B1ANS9 1081 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 E5RJQ4 531 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 COPEO14579 308 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 HNRNPDLO14979 420 aaKnown RBP18.53■□□□□ 0.56
NUP54-205ENST00000507257 AP1G1O43747 822 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 ATP9BO43861 1147 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 ENO1P06733 434 aaKnown RBP18.53■□□□□ 0.56
NUP54-205ENST00000507257 ZCCHC18P0CG32 403 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 AOC1P19801 751 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 OTUD4Q01804 1114 aaKnown RBP18.53■□□□□ 0.56
NUP54-205ENST00000507257 FAAP100Q0VG06 881 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 ASPHQ12797 758 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 DNAJC24Q6P3W2 148 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 SLC26A11Q86WA9 606 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 UBR7Q8N806 425 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 OR6Y1Q8NGX8 325 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 SRPK1Q96SB4 655 aaKnown RBP18.53■□□□□ 0.56
NUP54-205ENST00000507257 IQCGQ9H095 443 aaKnown RBP18.53■□□□□ 0.56
NUP54-205ENST00000507257 STN1Q9H668 368 aaKnown RBP18.53■□□□□ 0.56
NUP54-205ENST00000507257 S100A14Q9HCY8 104 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 GINM1Q9NU53 330 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 PPARGC1AQ9UBK2 798 aaKnown RBP18.53■□□□□ 0.56
NUP54-205ENST00000507257 XPO7Q9UIA9 1087 aaKnown RBP18.53■□□□□ 0.56
NUP54-205ENST00000507257 TEX264Q9Y6I9 313 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 STYXL1Q9Y6J8 313 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 WDR81Q562E7 1941 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 A0A1B0GVG6 124 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 F8VP50 259 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 RNASEH1O60930 286 aaKnown RBP18.53■□□□□ 0.56
NUP54-205ENST00000507257 VNN1O95497 513 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 CDH5P33151 784 aaPredicted RBP18.53■□□□□ 0.56
NUP54-205ENST00000507257 OGDHQ02218 1023 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 WASHC5Q12768 1159 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 ITGA9Q13797 1035 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 BBS9Q3SYG4 887 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 TEX44Q53QW1 395 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 MAP3K21Q5TCX8 1036 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 STRIP1Q5VSL9 837 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 ANGEL2Q5VTE6 544 aaKnown RBP18.53■□□□□ 0.56
NUP54-205ENST00000507257 C1orf146Q5VVC0 180 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 RSAD2Q8WXG1 361 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 BSNDQ8WZ55 320 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 JADE3Q92613 823 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 E2F7Q96AV8 911 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 DDX50Q9BQ39 737 aaKnown RBP18.53■□□□□ 0.56
NUP54-205ENST00000507257 KIFC3Q9BVG8 833 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 MAP3K20Q9NYL2 800 aaKnown RBP18.53■□□□□ 0.56
NUP54-205ENST00000507257 FEM1BQ9UK73 627 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 PPM1HQ9ULR3 514 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 SOX13Q9UN79 622 aa18.53■□□□□ 0.56
NUP54-205ENST00000507257 CCNT2O60583 730 aaKnown RBP18.52■□□□□ 0.56
NUP54-205ENST00000507257 SNNO75324 88 aaPredicted RBP18.52■□□□□ 0.56
NUP54-205ENST00000507257 C1QAP02745 245 aa18.52■□□□□ 0.56
NUP54-205ENST00000507257 KRT7P08729 469 aa18.52■□□□□ 0.56
NUP54-205ENST00000507257 GDF10P55107 478 aa18.52■□□□□ 0.56
NUP54-205ENST00000507257 KRT76Q01546 638 aa18.52■□□□□ 0.56
NUP54-205ENST00000507257 MTMR1Q13613 665 aa18.52■□□□□ 0.56
NUP54-205ENST00000507257 TXNRD3NBQ6F5E7 133 aa18.52■□□□□ 0.56
NUP54-205ENST00000507257 DHDDSQ86SQ9 333 aa18.52■□□□□ 0.56
NUP54-205ENST00000507257 ZNF606Q8WXB4 792 aa18.52■□□□□ 0.56
NUP54-205ENST00000507257 HAUS1Q96CS2 278 aa18.52■□□□□ 0.56
NUP54-205ENST00000507257 MCEEQ96PE7 176 aa18.52■□□□□ 0.56
NUP54-205ENST00000507257 THTPAQ9BU02 230 aa18.52■□□□□ 0.56
NUP54-205ENST00000507257 UBE2OQ9C0C9 1292 aaKnown RBP18.52■□□□□ 0.56
NUP54-205ENST00000507257 APOBEC3GQ9HC16 384 aaKnown RBP18.52■□□□□ 0.56
NUP54-205ENST00000507257 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.51■□□□□ 0.55
NUP54-205ENST00000507257 TMEM150BA6NC51 233 aa18.51■□□□□ 0.55
NUP54-205ENST00000507257 C2orf71A6NGG8 1288 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms