RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 CCDC40Q4G0X9 1142 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 WDR44Q5JSH3 913 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 PAQR9Q6ZVX9 377 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 FRMD5Q7Z6J6 570 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 FILIP1Q7Z7B0 1213 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 CCDC105Q8IYK2 499 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 FUKQ8N0W3 1084 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 CSGALNACT1Q8TDX6 532 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 SLC35C1Q96A29 364 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 SMARCD1Q96GM5 515 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 FAXDC2Q96IV6 333 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 TTLL2Q9BWV7 592 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 NT5C1AQ9BXI3 368 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 DMAP1Q9NPF5 467 aaPredicted RBP16.51■□□□□ 0.23
MED28-204ENST00000506409 KRT82Q9NSB4 513 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 FAM49BQ9NUQ9 324 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 TDP1Q9NUW8 608 aa16.51■□□□□ 0.23
MED28-204ENST00000506409 TRAV19A0A0A6YYK7 116 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 ARNTLO00327 626 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 CKMP06732 381 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 DCNP07585 359 aaKnown RBP16.5■□□□□ 0.23
MED28-204ENST00000506409 STX17P56962 302 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 NHLH1Q02575 133 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 IFRD2Q12894 506 aaPredicted RBP16.5■□□□□ 0.23
MED28-204ENST00000506409 ARHGAP29Q52LW3 1261 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 ZNF852Q6ZMS4 543 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 CLEC17AQ6ZS10 378 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 C12orf29Q8N999 325 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 DTWD2Q8NBA8 298 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 SLC2A14Q8TDB8 520 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 USP13Q92995 863 aaPredicted RBP16.5■□□□□ 0.23
MED28-204ENST00000506409 ZFYVE19Q96K21 471 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 TWNKQ96RR1 684 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 KCNK16Q96T55 309 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 DNAI2Q9GZS0 605 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 KIF9Q9HAQ2 790 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 LTB4R2Q9NPC1 389 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 THG1LQ9NWX6 298 aaKnown RBP16.5■□□□□ 0.23
MED28-204ENST00000506409 TRPM5Q9NZQ8 1165 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 CCL26Q9Y258 94 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 PIAS3Q9Y6X2 628 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 GREB1Q4ZG55 1949 aa16.5■□□□□ 0.23
MED28-204ENST00000506409 TICRRQ7Z2Z1 1910 aa16.49■□□□□ 0.23
MED28-204ENST00000506409 C2orf78A6NCI8 922 aa16.49■□□□□ 0.23
MED28-204ENST00000506409 CILPO75339 1184 aa16.49■□□□□ 0.23
MED28-204ENST00000506409 AP1G2O75843 785 aa16.49■□□□□ 0.23
MED28-204ENST00000506409 USP17L7P0C7H9 530 aa16.49■□□□□ 0.23
MED28-204ENST00000506409 PLCB2Q00722 1185 aa16.49■□□□□ 0.23
MED28-204ENST00000506409 ZNF268Q14587 947 aaPredicted RBP16.49■□□□□ 0.23
MED28-204ENST00000506409 NUP93Q8N1F7 819 aa16.49■□□□□ 0.23
MED28-204ENST00000506409 TTC39CQ8N584 583 aa16.49■□□□□ 0.23
MED28-204ENST00000506409 SLITRK1Q96PX8 696 aa16.49■□□□□ 0.23
MED28-204ENST00000506409 OSBPL6Q9BZF3 934 aa16.49■□□□□ 0.23
MED28-204ENST00000506409 IRF2BPLQ9H1B7 796 aa16.49■□□□□ 0.23
MED28-204ENST00000506409 MRPS17Q9Y2R5 130 aaKnown RBP16.49■□□□□ 0.23
MED28-204ENST00000506409 COQ4Q9Y3A0 265 aa16.49■□□□□ 0.23
MED28-204ENST00000506409 CACNA1HO95180 2353 aa16.49■□□□□ 0.23
MED28-204ENST00000506409 COL4A2P08572 1712 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 FAM170BA6NMN3 283 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 H0Y858 1186 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 MAN2B1O00754 1011 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 RTN3O95197 1032 aaPredicted RBP16.48■□□□□ 0.23
MED28-204ENST00000506409 GNA14O95837 355 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 YWHAQP27348 245 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 ADORA2BP29275 332 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 PPP3CCP48454 512 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 FMO5P49326 533 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 PDE6CP51160 858 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 KPNA1P52294 538 aaPredicted RBP16.48■□□□□ 0.23
MED28-204ENST00000506409 TAF10Q12962 218 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 ARL14EPQ8N8R7 260 aaPredicted RBP16.48■□□□□ 0.23
MED28-204ENST00000506409 WHAMMQ8TF30 809 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 TATDN2Q93075 761 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 SLC22A12Q96S37 553 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 CYP2S1Q96SQ9 504 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 NELL2Q99435 816 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 HNRNPABQ99729 332 aaKnown RBP16.48■□□□□ 0.23
MED28-204ENST00000506409 ARID3AQ99856 593 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 CLSTN2Q9H4D0 955 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 DLGAP2Q9P1A6 1054 aa16.48■□□□□ 0.23
MED28-204ENST00000506409 MTF2Q9Y483 593 aaPredicted RBP16.48■□□□□ 0.23
MED28-204ENST00000506409 ZNF638Q14966 1978 aaKnown RBP16.47■□□□□ 0.23
MED28-204ENST00000506409 F5P12259 2224 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 ZNF840PA6NDX5 716 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 SHISA7A6NL88 538 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 NCAM2O15394 837 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 ABL1P00519 1130 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 FAM200BP0CF97 657 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 GLULP15104 373 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 PFKLP17858 780 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 HDCP19113 662 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 TARSP26639 723 aaKnown RBP16.47■□□□□ 0.23
MED28-204ENST00000506409 SLC5A3P53794 718 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 MLLT6P55198 1093 aaPredicted RBP16.47■□□□□ 0.23
MED28-204ENST00000506409 MAP3K7CLP57077 242 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 ZNF394Q53GI3 561 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 CC2D1AQ6P1N0 951 aaPredicted RBP16.47■□□□□ 0.23
MED28-204ENST00000506409 TTC16Q8NEE8 873 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 SCAMP5Q8TAC9 235 aa16.47■□□□□ 0.23
MED28-204ENST00000506409 FAM3CQ92520 227 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms