RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 DEFB107AQ8IZN7 70 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 TTLL6Q8N841 843 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 FBXL13Q8NEE6 735 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 SHC3Q92529 594 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 FAM20AQ96MK3 541 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 PGLYRP2Q96PD5 576 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 NAP1L4Q99733 375 aaKnown RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 WDR11Q9BZH6 1224 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 TJP2Q9UDY2 1190 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 INPP5FQ9Y2H2 1132 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 UBR2Q8IWV8 1755 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 ZNF536O15090 1300 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 GOLGA8QA0A0J9YX86 632 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 GOLGA8OA6NCC3 632 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 GOLGA8NF8WBI6 632 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 TRAFD1O14545 582 aaPredicted RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 HNRNPDLO14979 420 aaKnown RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 GRIN3BO60391 1043 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 ZNF189O75820 626 aaPredicted RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 PROSCO94903 275 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 ASLP04424 464 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 WEE2P0C1S8 567 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 ADSSP30520 456 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 PRELPP51888 382 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 ADARP55265 1226 aaKnown RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 RPL10AP62906 217 aaKnown RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 MSLNQ13421 630 aaPredicted RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 LRRC8BQ6P9F7 803 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 UTS2BQ765I0 119 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 UNC5BQ8IZJ1 945 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 OGFOD1Q8N543 542 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 BBOF1Q8ND07 529 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 USP13Q92995 863 aaPredicted RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 PPP2R3CQ969Q6 453 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 CCDC17Q96LX7 622 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 ACCSQ96QU6 501 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 WDR83Q9BRX9 315 aaKnown RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 DCUN1D5Q9BTE7 237 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 MRPL1Q9BYD6 325 aaKnown RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 C1orf112Q9NSG2 853 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 HSFX1Q9UBD0 423 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 CCPG1Q9ULG6 757 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 PHF24Q9UPV7 400 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 AFG3L2Q9Y4W6 797 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 ROBO3Q96MS0 1386 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 C15orf38-AP3S2A0A0A6YYH1 394 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 TTLL13PA6NNM8 815 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 H3BSA7 217 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 NEMP1O14524 444 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 CLPTM1O96005 669 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 SNHG28P0DPA3 235 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 DESP17661 470 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 FGFR3P22607 806 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 CRADDP78560 199 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 GABPAQ06546 454 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 KLF1Q13351 362 aaPredicted RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 MAMLD1Q13495 774 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 PRKG1Q13976 671 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 NRF1Q16656 503 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 NADK2Q4G0N4 442 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 BRDTQ58F21 947 aaPredicted RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 C6orf52Q5T4I8 152 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 DUS1LQ6P1R4 473 aaKnown RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 C1orf228Q6PIY5 440 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 ARPINQ7Z6K5 226 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 CDAN1Q8IWY9 1227 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 NME8Q8N427 588 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 ZNF276Q8N554 614 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 BANPQ8N9N5 519 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 GRIN3AQ8TCU5 1115 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 DDX1Q92499 740 aaKnown RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 LENG1Q96BZ8 264 aaPredicted RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 PRMT6Q96LA8 375 aaPredicted RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 TEKT3Q9BXF9 490 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 GLIS2Q9BZE0 524 aaPredicted RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 FAM192AQ9GZU8 254 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 TLE6Q9H808 572 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 PLA2G4CQ9UP65 541 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 LZTS1Q9Y250 596 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 ACTL7BQ9Y614 415 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 COL16A1Q07092 1604 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 AHDC1Q5TGY3 1603 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 NOP56O00567 594 aaKnown RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 AIM2O14862 343 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 ITM2AO43736 263 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 TCEA3O75764 348 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 GNA15P30679 374 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 MAN1A1P33908 653 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 PHBP35232 272 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 SOX11P35716 441 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 ABCG1P45844 678 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 PKNOX1P55347 436 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 WNT7BP56706 349 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 CDO1Q16878 200 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 RNASEH2BQ5TBB1 312 aaKnown RBP7.94□□□□□ -1.14
NEDD9-208ENST00000504387 KLHDC10Q6PID8 442 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 DHDDSQ86SQ9 333 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 CPNE9Q8IYJ1 553 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 PDIK1LQ8N165 341 aa7.94□□□□□ -1.14
NEDD9-208ENST00000504387 NDUFAF2Q8N183 169 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms