RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 HEPACAM2A8MVW5 462 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 CYB561D2O14569 222 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 IKBKBO14920 756 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 PRAMEF12O95522 483 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 GDI1P31150 447 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 LIG3P49916 1009 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 CYP4F8P98187 520 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 PRKCQQ04759 706 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 MYBPC2Q14324 1141 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 GAS6Q14393 721 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 CASP8Q14790 479 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 SLC39A12Q504Y0 691 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 WDR93Q6P2C0 686 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 SV2BQ7L1I2 683 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 DNAJB7Q7Z6W7 309 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-234ENST00000493923 USP37Q86T82 979 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 TMEM150AQ86TG1 271 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 DHX40Q8IX18 779 aaKnown RBP8.71□□□□□ -1.02
HDAC6-234ENST00000493923 DCLK2Q8N568 766 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 C1orf127Q8N9H9 656 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 KRI1Q8N9T8 703 aaKnown RBP8.71□□□□□ -1.02
HDAC6-234ENST00000493923 LINC00301Q8NCQ3 95 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 TTC8Q8TAM2 541 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 FAM76AQ8TAV0 307 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 GIPC2Q8TF65 315 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 POMGNT1Q8WZA1 660 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 SMARCD2Q92925 531 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 NKD2Q969F2 451 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-234ENST00000493923 CLDN23Q96B33 292 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 ZFYVE19Q96K21 471 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 CALR3Q96L12 384 aaKnown RBP8.71□□□□□ -1.02
HDAC6-234ENST00000493923 ZNF512Q96ME7 567 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-234ENST00000493923 ZNF396Q96N95 335 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-234ENST00000493923 PYM1Q9BRP8 204 aaKnown RBP8.71□□□□□ -1.02
HDAC6-234ENST00000493923 ZCWPW1Q9H0M4 648 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 SMG9Q9H0W8 520 aaKnown RBP8.71□□□□□ -1.02
HDAC6-234ENST00000493923 MRPL44Q9H9J2 332 aaKnown RBP8.71□□□□□ -1.02
HDAC6-234ENST00000493923 ASAH2Q9NR71 780 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 C2orf42Q9NWW7 574 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 SIX4Q9UIU6 781 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 NDRG2Q9UN36 371 aaKnown RBP8.71□□□□□ -1.02
HDAC6-234ENST00000493923 ANAPC1Q9H1A4 1944 aa8.71□□□□□ -1.02
HDAC6-234ENST00000493923 GREB1Q4ZG55 1949 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 ZNF197O14709 1029 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 STX10O60499 249 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 MICAL2O94851 1124 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 SNUPNO95149 360 aaKnown RBP8.7□□□□□ -1.02
HDAC6-234ENST00000493923 GCNT3O95395 438 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 ODC1P11926 461 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 TDGF1P13385 188 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 IDEP14735 1019 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 SCP2P22307 547 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 ACAT1P24752 427 aaKnown RBP8.7□□□□□ -1.02
HDAC6-234ENST00000493923 POLR2BP30876 1174 aaKnown RBP8.7□□□□□ -1.02
HDAC6-234ENST00000493923 STAT6P42226 847 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 TAF6P49848 677 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 CLNS1AP54105 237 aaKnown RBP8.7□□□□□ -1.02
HDAC6-234ENST00000493923 GNG11P61952 73 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 CSTF1Q05048 431 aaKnown RBP8.7□□□□□ -1.02
HDAC6-234ENST00000493923 ARID5BQ14865 1188 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 KYAT1Q16773 422 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 CCDC38Q502W7 563 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 CEP85LQ5SZL2 805 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 CYP4A22Q5TCH4 519 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 ARMCX5Q6P1M9 558 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 TXNDC11Q6PKC3 985 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 SHC4Q6S5L8 630 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 BRSK2Q8IWQ3 736 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 SUMF1Q8NBK3 374 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 LRRN4CLQ8ND94 238 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 OR5B17Q8NGF7 314 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 RSRC1Q96IZ7 334 aaKnown RBP8.7□□□□□ -1.02
HDAC6-234ENST00000493923 ACCSQ96QU6 501 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 BAG1Q99933 345 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-234ENST00000493923 ASB7Q9H672 318 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 SUDS3Q9H7L9 328 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-234ENST00000493923 BRD9Q9H8M2 597 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 TRPV4Q9HBA0 871 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 ZFP14Q9HCL3 533 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 RBM12Q9NTZ6 932 aaKnown RBP8.7□□□□□ -1.02
HDAC6-234ENST00000493923 PANK4Q9NVE7 773 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 SPATA6Q9NWH7 488 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-234ENST00000493923 CDC23Q9UJX2 597 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 AGAP1Q9UPQ3 857 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 DERAQ9Y315 318 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 C2CD2Q9Y426 696 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 NME7Q9Y5B8 376 aa8.7□□□□□ -1.02
HDAC6-234ENST00000493923 CNOT1A5YKK6 2376 aaKnown RBP8.7□□□□□ -1.02
HDAC6-234ENST00000493923 TPRP12270 2363 aaKnown RBP8.7□□□□□ -1.02
HDAC6-234ENST00000493923 GOLGA8KD6RF30 607 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 XPOTO43592 962 aaKnown RBP8.69□□□□□ -1.02
HDAC6-234ENST00000493923 CUTAO60888 179 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 RNF40O75150 1001 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 ATP2C2O75185 946 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 ITGB3P05106 788 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 HAPLN1P10915 354 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-234ENST00000493923 HMGA1P17096 107 aaKnown RBP8.69□□□□□ -1.02
HDAC6-234ENST00000493923 GAP43P17677 238 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 PSMC3P17980 439 aa8.69□□□□□ -1.02
HDAC6-234ENST00000493923 GABRR2P28476 465 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms