RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 NELFBQ8WX92 580 aa26.24■■□□□ 1.79
UPF3A-209ENST00000492270 USP13Q92995 863 aaPredicted RBP26.24■■□□□ 1.79
UPF3A-209ENST00000492270 LTB4R2Q9NPC1 389 aa26.24■■□□□ 1.79
UPF3A-209ENST00000492270 FAM49BQ9NUQ9 324 aa26.24■■□□□ 1.79
UPF3A-209ENST00000492270 OBP2AQ9NY56 170 aa26.24■■□□□ 1.79
UPF3A-209ENST00000492270 ZMYM5Q9UJ78 669 aa26.24■■□□□ 1.79
UPF3A-209ENST00000492270 F5P12259 2224 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 C2orf78A6NCI8 922 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 CD58P19256 250 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 INCA1Q0VD86 236 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 IFRD2Q12894 506 aaPredicted RBP26.23■■□□□ 1.79
UPF3A-209ENST00000492270 TTI2Q6NXR4 508 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 UNC93AQ86WB7 457 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 FUKQ8N0W3 1084 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 CELF5Q8N6W0 485 aaKnown RBP26.23■■□□□ 1.79
UPF3A-209ENST00000492270 C12orf29Q8N999 325 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 FBXL13Q8NEE6 735 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 BPIFB1Q8TDL5 484 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 CEP295NLQ96MC4 621 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 CYP2S1Q96SQ9 504 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 KCNK16Q96T55 309 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 TTLL2Q9BWV7 592 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 TRPV5Q9NQA5 729 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 PIAS3Q9Y6X2 628 aa26.23■■□□□ 1.79
UPF3A-209ENST00000492270 STX10O60499 249 aa26.22■■□□□ 1.79
UPF3A-209ENST00000492270 TARSP26639 723 aaKnown RBP26.22■■□□□ 1.79
UPF3A-209ENST00000492270 PPP1R2P41236 205 aa26.22■■□□□ 1.79
UPF3A-209ENST00000492270 CRYBG2Q8N1P7 616 aa26.22■■□□□ 1.79
UPF3A-209ENST00000492270 TTC8Q8TAM2 541 aa26.22■■□□□ 1.79
UPF3A-209ENST00000492270 SLC35C1Q96A29 364 aa26.22■■□□□ 1.79
UPF3A-209ENST00000492270 KRT82Q9NSB4 513 aa26.22■■□□□ 1.79
UPF3A-209ENST00000492270 RAB20Q9NX57 234 aa26.22■■□□□ 1.79
UPF3A-209ENST00000492270 ARMCX3Q9UH62 379 aaPredicted RBP26.22■■□□□ 1.79
UPF3A-209ENST00000492270 ATP8B3O60423 1300 aa26.21■■□□□ 1.79
UPF3A-209ENST00000492270 CACNA1IQ9P0X4 2223 aa26.21■■□□□ 1.79
UPF3A-209ENST00000492270 FAM170BA6NMN3 283 aa26.21■■□□□ 1.79
UPF3A-209ENST00000492270 SOX9P48436 509 aa26.21■■□□□ 1.79
UPF3A-209ENST00000492270 STX17P56962 302 aa26.21■■□□□ 1.79
UPF3A-209ENST00000492270 ARHGAP29Q52LW3 1261 aa26.21■■□□□ 1.79
UPF3A-209ENST00000492270 CCDC150Q8NCX0 1101 aa26.21■■□□□ 1.79
UPF3A-209ENST00000492270 SLC2A14Q8TDB8 520 aa26.21■■□□□ 1.79
UPF3A-209ENST00000492270 WHAMMQ8TF30 809 aa26.21■■□□□ 1.79
UPF3A-209ENST00000492270 ARID3AQ99856 593 aa26.21■■□□□ 1.79
UPF3A-209ENST00000492270 CYP3A43Q9HB55 503 aa26.21■■□□□ 1.79
UPF3A-209ENST00000492270 TDP1Q9NUW8 608 aa26.21■■□□□ 1.79
UPF3A-209ENST00000492270 GTSE1Q9NYZ3 720 aa26.21■■□□□ 1.79
UPF3A-209ENST00000492270 SOBPA7XYQ1 873 aa26.2■■□□□ 1.78
UPF3A-209ENST00000492270 CILPO75339 1184 aa26.2■■□□□ 1.78
UPF3A-209ENST00000492270 AP1G2O75843 785 aa26.2■■□□□ 1.78
UPF3A-209ENST00000492270 TNK2Q07912 1038 aa26.2■■□□□ 1.78
UPF3A-209ENST00000492270 ZNF852Q6ZMS4 543 aa26.2■■□□□ 1.78
UPF3A-209ENST00000492270 ARL14EPQ8N8R7 260 aaPredicted RBP26.2■■□□□ 1.78
UPF3A-209ENST00000492270 ZMIZ2Q8NF64 920 aa26.2■■□□□ 1.78
UPF3A-209ENST00000492270 CSGALNACT1Q8TDX6 532 aa26.2■■□□□ 1.78
UPF3A-209ENST00000492270 TATDN2Q93075 761 aa26.2■■□□□ 1.78
UPF3A-209ENST00000492270 SMARCD1Q96GM5 515 aa26.2■■□□□ 1.78
UPF3A-209ENST00000492270 CEP63Q96MT8 703 aa26.2■■□□□ 1.78
UPF3A-209ENST00000492270 SMOQ99835 787 aa26.2■■□□□ 1.78
UPF3A-209ENST00000492270 GCNT4Q9P109 453 aa26.2■■□□□ 1.78
UPF3A-209ENST00000492270 KIAA1468Q9P260 1216 aa26.2■■□□□ 1.78
UPF3A-209ENST00000492270 NDRG2Q9UN36 371 aaKnown RBP26.2■■□□□ 1.78
UPF3A-209ENST00000492270 BEST1O76090 585 aa26.19■■□□□ 1.78
UPF3A-209ENST00000492270 CKMP06732 381 aa26.19■■□□□ 1.78
UPF3A-209ENST00000492270 ADORA2BP29275 332 aa26.19■■□□□ 1.78
UPF3A-209ENST00000492270 ANGPT1Q15389 498 aa26.19■■□□□ 1.78
UPF3A-209ENST00000492270 CCDC40Q4G0X9 1142 aa26.19■■□□□ 1.78
UPF3A-209ENST00000492270 FILIP1Q7Z7B0 1213 aa26.19■■□□□ 1.78
UPF3A-209ENST00000492270 ATOH1Q92858 354 aaPredicted RBP26.19■■□□□ 1.78
UPF3A-209ENST00000492270 NT5C1AQ9BXI3 368 aa26.19■■□□□ 1.78
UPF3A-209ENST00000492270 KIF9Q9HAQ2 790 aa26.19■■□□□ 1.78
UPF3A-209ENST00000492270 DMAP1Q9NPF5 467 aaPredicted RBP26.19■■□□□ 1.78
UPF3A-209ENST00000492270 TRPM5Q9NZQ8 1165 aa26.19■■□□□ 1.78
UPF3A-209ENST00000492270 TRAV19A0A0A6YYK7 116 aa26.18■■□□□ 1.78
UPF3A-209ENST00000492270 USP17L7P0C7H9 530 aa26.18■■□□□ 1.78
UPF3A-209ENST00000492270 TAF10Q12962 218 aa26.18■■□□□ 1.78
UPF3A-209ENST00000492270 PAK1Q13153 545 aa26.18■■□□□ 1.78
UPF3A-209ENST00000492270 ZNF268Q14587 947 aaPredicted RBP26.18■■□□□ 1.78
UPF3A-209ENST00000492270 NUP93Q8N1F7 819 aa26.18■■□□□ 1.78
UPF3A-209ENST00000492270 TTC16Q8NEE8 873 aa26.18■■□□□ 1.78
UPF3A-209ENST00000492270 SCAMP5Q8TAC9 235 aa26.18■■□□□ 1.78
UPF3A-209ENST00000492270 OSBPL6Q9BZF3 934 aa26.18■■□□□ 1.78
UPF3A-209ENST00000492270 COQ4Q9Y3A0 265 aa26.18■■□□□ 1.78
UPF3A-209ENST00000492270 BICDL2A1A5D9 508 aa26.17■■□□□ 1.78
UPF3A-209ENST00000492270 TNFRSF10BO14763 440 aa26.17■■□□□ 1.78
UPF3A-209ENST00000492270 SLC5A3P53794 718 aa26.17■■□□□ 1.78
UPF3A-209ENST00000492270 FZD5Q13467 585 aa26.17■■□□□ 1.78
UPF3A-209ENST00000492270 ZNF394Q53GI3 561 aa26.17■■□□□ 1.78
UPF3A-209ENST00000492270 TRIM68Q6AZZ1 485 aa26.17■■□□□ 1.78
UPF3A-209ENST00000492270 FRMD5Q7Z6J6 570 aa26.17■■□□□ 1.78
UPF3A-209ENST00000492270 ZNF687Q8N1G0 1237 aa26.17■■□□□ 1.78
UPF3A-209ENST00000492270 TRIML1Q8N9V2 468 aa26.17■■□□□ 1.78
UPF3A-209ENST00000492270 FAM3CQ92520 227 aa26.17■■□□□ 1.78
UPF3A-209ENST00000492270 METTL14Q9HCE5 456 aaKnown RBP26.17■■□□□ 1.78
UPF3A-209ENST00000492270 GKN1Q9NS71 199 aa26.17■■□□□ 1.78
UPF3A-209ENST00000492270 THG1LQ9NWX6 298 aaKnown RBP26.17■■□□□ 1.78
UPF3A-209ENST00000492270 EHD2Q9NZN4 543 aa26.17■■□□□ 1.78
UPF3A-209ENST00000492270 FANCMQ8IYD8 2048 aa26.17■■□□□ 1.78
UPF3A-209ENST00000492270 ZNF840PA6NDX5 716 aa26.16■■□□□ 1.78
UPF3A-209ENST00000492270 MAN2B1O00754 1011 aa26.16■■□□□ 1.78
UPF3A-209ENST00000492270 ABL1P00519 1130 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms