RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 CMTM8Q8IZV2 173 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 NUP93Q8N1F7 819 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 C12orf29Q8N999 325 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 HEXIM2Q96MH2 286 aaKnown RBP14.2□□□□□ -0.14
CCL28-202ENST00000489442 SLITRK1Q96PX8 696 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 KCNK16Q96T55 309 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 DMAP1Q9NPF5 467 aaPredicted RBP14.2□□□□□ -0.14
CCL28-202ENST00000489442 KRT82Q9NSB4 513 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 CISHQ9NSE2 258 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 THG1LQ9NWX6 298 aaKnown RBP14.2□□□□□ -0.14
CCL28-202ENST00000489442 TRPM5Q9NZQ8 1165 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 TICRRQ7Z2Z1 1910 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 TRAV19A0A0A6YYK7 116 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 SOBPA7XYQ1 873 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 RTN3O95197 1032 aaPredicted RBP14.19□□□□□ -0.14
CCL28-202ENST00000489442 CKMP06732 381 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 FAM200BP0CF97 657 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 WEE1P30291 646 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 CACNA2D1P54289 1103 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 VCPP55072 806 aaKnown RBP14.19□□□□□ -0.14
CCL28-202ENST00000489442 USP46P62068 366 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 KCNH2Q12809 1159 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 MLF2Q15773 248 aaPredicted RBP14.19□□□□□ -0.14
CCL28-202ENST00000489442 FUKQ8N0W3 1084 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 CELF5Q8N6W0 485 aaKnown RBP14.19□□□□□ -0.14
CCL28-202ENST00000489442 TTC16Q8NEE8 873 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 BPIFB1Q8TDL5 484 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 DNASE1L2Q92874 299 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 CYFIP2Q96F07 1278 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 TWNKQ96RR1 684 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 SMG9Q9H0W8 520 aaKnown RBP14.19□□□□□ -0.14
CCL28-202ENST00000489442 TBC1D17Q9HA65 648 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 TDP1Q9NUW8 608 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 OBP2AQ9NY56 170 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 MIA3Q5JRA6 1907 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 KMT2EQ8IZD2 1858 aa14.19□□□□□ -0.14
CCL28-202ENST00000489442 P4HA2O15460 535 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 PRAMEF12O95522 483 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 AFPP02771 609 aaKnown RBP14.18□□□□□ -0.14
CCL28-202ENST00000489442 USP17L7P0C7H9 530 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 NPR3P17342 541 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 TBXAS1P24557 533 aaPredicted RBP14.18□□□□□ -0.14
CCL28-202ENST00000489442 YWHAQP27348 245 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 PPP3CCP48454 512 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 PDE6CP51160 858 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 MARSP56192 900 aaKnown RBP14.18□□□□□ -0.14
CCL28-202ENST00000489442 MAP3K7CLP57077 242 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 PRKCQQ04759 706 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 TAF10Q12962 218 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 CUL2Q13617 745 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 ARHGAP29Q52LW3 1261 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 PAQR9Q6ZVX9 377 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 TRIM59Q8IWR1 403 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 GPT2Q8TD30 523 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 CSGALNACT1Q8TDX6 532 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 FBXO32Q969P5 355 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 TMEM176AQ96HP8 235 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 NT5C1BQ96P26 610 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 PRRX2Q99811 253 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 ARID3AQ99856 593 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 TTLL2Q9BWV7 592 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 FAM124BQ9H5Z6 455 aaPredicted RBP14.18□□□□□ -0.14
CCL28-202ENST00000489442 HEBP1Q9NRV9 189 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 TMEM30AQ9NV96 361 aa14.18□□□□□ -0.14
CCL28-202ENST00000489442 PMM2O15305 246 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 CHADO15335 359 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 TADA3O75528 432 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 HDCP19113 662 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 AOC1P19801 751 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 MTIF2P46199 727 aaKnown RBP14.17□□□□□ -0.14
CCL28-202ENST00000489442 DPCR1Q3MIW9 517 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 PHLDB3Q6NSJ2 640 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 CC2D1AQ6P1N0 951 aaPredicted RBP14.17□□□□□ -0.14
CCL28-202ENST00000489442 TPRG1Q6ZUI0 275 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 PPM1KQ8N3J5 372 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 WHAMMQ8TF30 809 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 JAKMIP2Q96AA8 810 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 RSPRY1Q96DX4 576 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 CNOT6LQ96LI5 555 aaKnown RBP14.17□□□□□ -0.14
CCL28-202ENST00000489442 CYP2S1Q96SQ9 504 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 HNRNPABQ99729 332 aaKnown RBP14.17□□□□□ -0.14
CCL28-202ENST00000489442 SMOQ99835 787 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 KCNH6Q9H252 994 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 KIF9Q9HAQ2 790 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 SIT1Q9Y3P8 196 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 CACNA1HO95180 2353 aa14.17□□□□□ -0.14
CCL28-202ENST00000489442 C2orf78A6NCI8 922 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 MBD3O95983 291 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 ERCC5P28715 1186 aaPredicted RBP14.16□□□□□ -0.14
CCL28-202ENST00000489442 KPNA1P52294 538 aaPredicted RBP14.16□□□□□ -0.14
CCL28-202ENST00000489442 SLC5A3P53794 718 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 SLC8A3P57103 927 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 STARD6P59095 220 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 PLCB2Q00722 1185 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 FCHO2Q0JRZ9 810 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 UBXN2BQ14CS0 331 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 PPP1R26Q5T8A7 1209 aaPredicted RBP14.16□□□□□ -0.14
CCL28-202ENST00000489442 IER5LQ5T953 404 aa14.16□□□□□ -0.14
CCL28-202ENST00000489442 CWF19L1Q69YN2 538 aaKnown RBP14.16□□□□□ -0.14
CCL28-202ENST00000489442 ZNF852Q6ZMS4 543 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms