RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 OGDHQ02218 1023 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 ZNF252P-AS1Q0IIN9 211 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 IFRD2Q12894 506 aaPredicted RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 TUBB2AQ13885 445 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 ZNF268Q14587 947 aaPredicted RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 MAPRE1Q15691 268 aaKnown RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 RTP2Q5QGT7 225 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 PPP1R15BQ5SWA1 713 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 TEX35Q5T0J7 233 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 SEL1L2Q5TEA6 688 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 OLFML1Q6UWY5 402 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 C4orf50Q6ZRC1 276 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 PAQR9Q6ZVX9 377 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 PIGZQ86VD9 579 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 SPATA2LQ8IUW3 424 aaPredicted RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 CMTR2Q8IYT2 770 aaKnown RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 DCP1BQ8IZD4 617 aaKnown RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 UBL4BQ8N7F7 174 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 CEP112Q8N8E3 955 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 CLEC4CQ8WTT0 213 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 SLC35F5Q8WV83 523 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 KRT35Q92764 455 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 TOP1MTQ969P6 601 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 MCRS1Q96EZ8 462 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 TMEM169Q96HH4 297 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 HES6Q96HZ4 224 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 ZNF558Q96NG5 402 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 HTATIP2Q9BUP3 242 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 TUBB2BQ9BVA1 445 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 SLC4A5Q9BY07 1137 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 DUSP16Q9BY84 665 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 GPR62Q9BZJ7 368 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 CWH43Q9H720 699 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 LRRC4Q9HBW1 653 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 ABCB6Q9NP58 842 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 DMAP1Q9NPF5 467 aaPredicted RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 TMLHEQ9NVH6 421 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 KLHL11Q9NVR0 708 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 ABI2Q9NYB9 513 aaPredicted RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 IP6K2Q9UHH9 426 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 LCMT1Q9UIC8 334 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 MRPL42Q9Y6G3 142 aaKnown RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 V9GYY5 206 aaPredicted RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 ATG2AQ2TAZ0 1938 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 COL4A4P53420 1690 aaPredicted RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 OBSL1O75147 1896 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 MKI67P46013 3256 aaKnown RBP7.27□□□□□ -1.25
PDAP1-203ENST00000488214 CCDC66A2RUB6 948 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 CTAGE15A4D2H0 777 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 TMEM191CA6NGB0 347 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 OR6C75A6NL08 312 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 SIGLEC16A6NMB1 481 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 H7C4K7 107 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 PGRMC1O00264 195 aaKnown RBP7.27□□□□□ -1.25
PDAP1-203ENST00000488214 DDX3YO15523 660 aaKnown RBP7.27□□□□□ -1.25
PDAP1-203ENST00000488214 PSTPIP1O43586 416 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 TADA3O75528 432 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 DAB1O75553 588 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 BEST1O76090 585 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 OAZ2O95190 189 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 FGBP02675 491 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 KRT1P04264 644 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 CTAGE8P0CG41 777 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 DESP17661 470 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 FGFR3P22607 806 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 BDNFP23560 247 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 CTNNA2P26232 953 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 CTNNA1P35221 906 aaKnown RBP7.27□□□□□ -1.25
PDAP1-203ENST00000488214 RFC1P35251 1148 aaPredicted RBP7.27□□□□□ -1.25
PDAP1-203ENST00000488214 FLT3P36888 993 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 SLC1A1P43005 524 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 ACADSBP45954 432 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 TKTL1P51854 596 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 EPHB4P54760 987 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 TAS2R40P59535 323 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 SLC6A3Q01959 620 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 C2orf54Q08AI8 447 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 ZNF211Q13398 564 aaPredicted RBP7.27□□□□□ -1.25
PDAP1-203ENST00000488214 PSMD5Q16401 504 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 CDO1Q16878 200 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 ZFYVE27Q5T4F4 411 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 DCAF12L1Q5VU92 463 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 FAM171BQ6P995 826 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 KCNT2Q6UVM3 1135 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 PRSS55Q6UWB4 352 aaPredicted RBP7.27□□□□□ -1.25
PDAP1-203ENST00000488214 ZNF365Q70YC5 407 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 GPRIN1Q7Z2K8 1008 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 CTAGE6Q86UF2 777 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 ZDHHC17Q8IUH5 632 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 CTAGE4Q8IX94 777 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 COLGALT1Q8NBJ5 622 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 STK32AQ8WU08 396 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 RIN2Q8WYP3 895 aaPredicted RBP7.27□□□□□ -1.25
PDAP1-203ENST00000488214 ALG3Q92685 438 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 CD101Q93033 1021 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 FAM149B1Q96BN6 582 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 ZNF689Q96CS4 500 aaPredicted RBP7.27□□□□□ -1.25
PDAP1-203ENST00000488214 IGSF21Q96ID5 467 aa7.27□□□□□ -1.25
PDAP1-203ENST00000488214 MS4A14Q96JA4 679 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms