RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 REC114Q7Z4M0 266 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF598Q86UK7 904 aaKnown RBP5.66□□□□□ -1.5
CCDC39-205ENST00000485055 C4orf19Q8IY42 314 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 CCDC116Q8IYX3 515 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 ALDH16A1Q8IZ83 802 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 MOSPD2Q8NHP6 518 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 C17orf50Q8WW18 174 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 LINC01599Q8WXQ3 324 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 UIMC1Q96RL1 719 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 PI4K2AQ9BTU6 479 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 ADAM19Q9H013 955 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 MAGEH1Q9H213 219 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 CCDC68Q9H2F9 335 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 BMP2KQ9NSY1 1161 aaPredicted RBP5.66□□□□□ -1.5
CCDC39-205ENST00000485055 TUBE1Q9UJT0 475 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 VAV3Q9UKW4 847 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 DDX49Q9Y6V7 483 aaKnown RBP5.66□□□□□ -1.5
CCDC39-205ENST00000485055 POTEB3A0JP26 581 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 BLACEA4D250 179 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 PI4K2BG5E9Z4 385 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 TNFRSF10AO00220 468 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 CSTBP04080 98 aaKnown RBP5.66□□□□□ -1.5
CCDC39-205ENST00000485055 CYP1A2P05177 515 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 PCSK2P16519 638 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 CCNCP24863 283 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 HOXD13P35453 343 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 ADH7P40394 386 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 SPIRE1Q08AE8 756 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 BLMHQ13867 455 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 MAP7Q14244 749 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 OASLQ15646 514 aaKnown RBP5.66□□□□□ -1.5
CCDC39-205ENST00000485055 TIGD6Q17RP2 521 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 ARL13BQ3SXY8 428 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 KRTCAP3Q53RY4 240 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 KIAA1211LQ6NV74 962 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 POTEBQ6S5H4 581 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 CHST3Q7LGC8 479 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 RTN4RL1Q86UN2 441 aaPredicted RBP5.66□□□□□ -1.5
CCDC39-205ENST00000485055 PLA2G4DQ86XP0 818 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 BLIDQ8IZY5 108 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 LRRC71Q8N4P6 559 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 CLRN3Q8NCR9 226 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 DBF4BQ8NFT6 615 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 HTRA1Q92743 480 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 ERCC4Q92889 916 aaPredicted RBP5.66□□□□□ -1.5
CCDC39-205ENST00000485055 NACC2Q96BF6 587 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 ACSF2Q96CM8 615 aaPredicted RBP5.66□□□□□ -1.5
CCDC39-205ENST00000485055 PABPC5Q96DU9 382 aaKnown RBP5.66□□□□□ -1.5
CCDC39-205ENST00000485055 AZI2Q9H6S1 392 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 BCAS3Q9H6U6 928 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF302Q9NR11 478 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 NRBP2Q9NSY0 501 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 IRAK3Q9Y616 596 aa5.66□□□□□ -1.5
CCDC39-205ENST00000485055 EPOPA6NHQ4 379 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 H0YC42 278 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 CAPN9O14815 690 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 MSH4O15457 936 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 FGFR1P11362 822 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 AXLP30530 894 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 ADSLP30566 484 aaPredicted RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 ADD1P35611 737 aaKnown RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF165P49910 485 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 ARFIP1P53367 373 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 POLGP54098 1239 aaPredicted RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 DEFB103AP81534 67 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 FOXK2Q01167 660 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 SLC20A2Q08357 652 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 TEAD4Q15561 434 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 TRIP4Q15650 581 aaPredicted RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 PTPRNQ16849 979 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 XKR3Q5GH77 459 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 PHLPP2Q6ZVD8 1323 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 BEND5Q7L4P6 421 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 HEATR3Q7Z4Q2 680 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 TMEM192Q8IY95 271 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF527Q8NB42 609 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 OR6P1Q8NGX9 317 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 HDAC7Q8WUI4 952 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 DIO2Q92813 273 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 C18orf8Q96DM3 657 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 TEKT5Q96M29 485 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 RUNDC3BQ96NL0 473 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 FNBP1Q96RU3 617 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 USB1Q9BQ65 265 aaKnown RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 MYL10Q9BUA6 226 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 TMEM120AQ9BXJ8 343 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 OXCT2Q9BYC2 517 aaPredicted RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 MRPL4Q9BYD3 311 aaKnown RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 B3GNT5Q9BYG0 378 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 SUGCTQ9HAC7 445 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 PRDM6Q9NQX0 595 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 SETD4Q9NVD3 440 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 ZNHIT6Q9NWK9 470 aaKnown RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 TMEM161AQ9NX61 479 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 NSMCE4AQ9NXX6 385 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 ORC3Q9UBD5 711 aaPredicted RBP5.65□□□□□ -1.5
CCDC39-205ENST00000485055 VPS28Q9UK41 221 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 DUSP12Q9UNI6 340 aa5.65□□□□□ -1.5
CCDC39-205ENST00000485055 LRRC72A6NJI9 287 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms