RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 SASS6Q6UVJ0 657 aa17.21■□□□□ 0.35
DDR1-246ENST00000485023 RBM43Q6ZSC3 357 aaKnown RBP17.21■□□□□ 0.35
DDR1-246ENST00000485023 RRAGAQ7L523 313 aa17.21■□□□□ 0.35
DDR1-246ENST00000485023 ARHGEF19Q8IW93 802 aa17.21■□□□□ 0.35
DDR1-246ENST00000485023 YAF2Q8IY57 180 aa17.21■□□□□ 0.35
DDR1-246ENST00000485023 CMTM8Q8IZV2 173 aa17.21■□□□□ 0.35
DDR1-246ENST00000485023 FBXL6Q8N531 539 aa17.21■□□□□ 0.35
DDR1-246ENST00000485023 SLC4A11Q8NBS3 891 aa17.21■□□□□ 0.35
DDR1-246ENST00000485023 SMOQ99835 787 aa17.21■□□□□ 0.35
DDR1-246ENST00000485023 TRMT61BQ9BVS5 477 aaKnown RBP17.21■□□□□ 0.35
DDR1-246ENST00000485023 BRD9Q9H8M2 597 aa17.21■□□□□ 0.35
DDR1-246ENST00000485023 ARHGEF3Q9NR81 526 aa17.21■□□□□ 0.35
DDR1-246ENST00000485023 SLC2A4RGQ9NR83 387 aa17.21■□□□□ 0.35
DDR1-246ENST00000485023 GCNT4Q9P109 453 aa17.21■□□□□ 0.35
DDR1-246ENST00000485023 C2orf78A6NCI8 922 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 STK25O00506 426 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 P4HA2O15460 535 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 CKMP06732 381 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 PSMC3P17980 439 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 ERCC5P28715 1186 aaPredicted RBP17.2■□□□□ 0.34
DDR1-246ENST00000485023 AVPR1AP37288 418 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 SLC5A3P53794 718 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 TAF10Q12962 218 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 PPP1R26Q5T8A7 1209 aaPredicted RBP17.2■□□□□ 0.34
DDR1-246ENST00000485023 NUP93Q8N1F7 819 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 ZMIZ2Q8NF64 920 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 SCAMP5Q8TAC9 235 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 LMO3Q8TAP4 145 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 TMEM176AQ96HP8 235 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 LRRC3BQ96PB8 259 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 SLC22A12Q96S37 553 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 HNRNPABQ99729 332 aaKnown RBP17.2■□□□□ 0.34
DDR1-246ENST00000485023 CRACR2AQ9BSW2 395 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 DNAI2Q9GZS0 605 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 THAP9Q9H5L6 903 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 TRPV4Q9HBA0 871 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 TMEM63CQ9P1W3 806 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 WNT16Q9UBV4 365 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 CCL26Q9Y258 94 aa17.2■□□□□ 0.34
DDR1-246ENST00000485023 OBSL1O75147 1896 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 CD19P15391 556 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 TBXAS1P24557 533 aaPredicted RBP17.19■□□□□ 0.34
DDR1-246ENST00000485023 DDX6P26196 483 aaKnown RBP eCLIP17.19■□□□□ 0.34
DDR1-246ENST00000485023 YWHAEP62258 255 aaKnown RBP17.19■□□□□ 0.34
DDR1-246ENST00000485023 CLEC20AQ6ZU45 233 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 C11orf57Q6ZUT1 292 aaPredicted RBP17.19■□□□□ 0.34
DDR1-246ENST00000485023 GPRIN1Q7Z2K8 1008 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 BMP8AQ7Z5Y6 402 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 MON1AQ86VX9 555 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 FAM114A1Q8IWE2 563 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 TTC39CQ8N584 583 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 EHBP1Q8NDI1 1231 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 DEPDC1BQ8WUY9 529 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 FBXO32Q969P5 355 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 FAXDC2Q96IV6 333 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 ZFYVE19Q96K21 471 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 CYP2S1Q96SQ9 504 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 TTLL2Q9BWV7 592 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 SAMSN1Q9NSI8 373 aaKnown RBP17.19■□□□□ 0.34
DDR1-246ENST00000485023 EHD2Q9NZN4 543 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 TRPM5Q9NZQ8 1165 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 PCDHB4Q9Y5E5 795 aa17.19■□□□□ 0.34
DDR1-246ENST00000485023 TRAV19A0A0A6YYK7 116 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 ZNF263O14978 683 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 PMM2O15305 246 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 CALCAP01258 141 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 PRKCSHP14314 528 aaPredicted RBP17.18■□□□□ 0.34
DDR1-246ENST00000485023 YWHAQP27348 245 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 PFKPQ01813 784 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 APBA1Q02410 837 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 STX1AQ16623 288 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 GOLGA7BQ2TAP0 167 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 CWF19L1Q69YN2 538 aaKnown RBP17.18■□□□□ 0.34
DDR1-246ENST00000485023 CAVIN1Q6NZI2 390 aaKnown RBP17.18■□□□□ 0.34
DDR1-246ENST00000485023 GJB7Q6PEY0 223 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 TMEM270Q6UE05 265 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 MFSD6LQ8IWD5 586 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 UBR7Q8N806 425 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 ARL14EPQ8N8R7 260 aaPredicted RBP17.18■□□□□ 0.34
DDR1-246ENST00000485023 TTC8Q8TAM2 541 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 USP13Q92995 863 aaPredicted RBP17.18■□□□□ 0.34
DDR1-246ENST00000485023 CEP295NLQ96MC4 621 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 SLITRK1Q96PX8 696 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 TBC1D17Q9HA65 648 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 HEBP1Q9NRV9 189 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 NFE2L3Q9Y4A8 694 aa17.18■□□□□ 0.34
DDR1-246ENST00000485023 KCNJ18B7U540 433 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 PES1O00541 588 aaKnown RBP17.17■□□□□ 0.34
DDR1-246ENST00000485023 TNFRSF10BO14763 440 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 RTN3O95197 1032 aaPredicted RBP17.17■□□□□ 0.34
DDR1-246ENST00000485023 NPR3P17342 541 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 KCNJ12Q14500 433 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 MLF2Q15773 248 aaPredicted RBP17.17■□□□□ 0.34
DDR1-246ENST00000485023 MAN2A1Q16706 1144 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 SLC44A4Q53GD3 710 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 PHLDB3Q6NSJ2 640 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 TPRG1Q6ZUI0 275 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 CELF5Q8N6W0 485 aaKnown RBP17.17■□□□□ 0.34
DDR1-246ENST00000485023 TMEM105Q8N8V8 129 aa17.17■□□□□ 0.34
DDR1-246ENST00000485023 RIN3Q8TB24 985 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms