RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 CSH2P0DML3 217 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 ACO1P21399 889 aaKnown RBP12.98□□□□□ -0.33
PTPRF-213ENST00000481019 GPC5P78333 572 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 GRM2Q14416 872 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 MIIPQ5JXC2 388 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 TXNDC8Q6A555 127 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 PHLDB3Q6NSJ2 640 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 SARM1Q6SZW1 724 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 VITQ6UXI7 678 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 RRAGAQ7L523 313 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 GPRIN1Q7Z2K8 1008 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 CCDC150Q8NCX0 1101 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 SCAMP5Q8TAC9 235 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 RIN3Q8TB24 985 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 TRMT2BQ96GJ1 504 aaKnown RBP12.98□□□□□ -0.33
PTPRF-213ENST00000481019 TNIP3Q96KP6 325 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 MYRFLQ96LU7 910 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 KREMEN1Q96MU8 473 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 SLC22A12Q96S37 553 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 CRACR2AQ9BSW2 395 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 NT5C1AQ9BXI3 368 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 THAP9Q9H5L6 903 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 KRT82Q9NSB4 513 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 AJAP1Q9UKB5 411 aaPredicted RBP12.98□□□□□ -0.33
PTPRF-213ENST00000481019 NFE2L3Q9Y4A8 694 aa12.98□□□□□ -0.33
PTPRF-213ENST00000481019 PATJQ8NI35 1801 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 COL4A2P08572 1712 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 GOLGA6L6A8MZA4 724 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 HHLA1C9JL84 531 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 ECI2O75521 394 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 AP1G2O75843 785 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 CFHP08603 1231 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 SLC9A1P19634 815 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 MAP3K7CLP57077 242 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 SIGLEC14Q08ET2 396 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 TAF12Q16514 161 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 FILIP1LQ4L180 1135 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 TMEM31Q5JXX7 168 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 PPP1R26Q5T8A7 1209 aaPredicted RBP12.97□□□□□ -0.33
PTPRF-213ENST00000481019 DPY19L2P1Q6NXN4 242 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 ARID3BQ8IVW6 561 aaPredicted RBP12.97□□□□□ -0.33
PTPRF-213ENST00000481019 UBALD2Q8IYN6 164 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 SMARCD2Q92925 531 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 HNRNPABQ99729 332 aaKnown RBP12.97□□□□□ -0.33
PTPRF-213ENST00000481019 ZSWIM1Q9BR11 485 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 TTLL2Q9BWV7 592 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 TRIM5Q9C035 493 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 SLITRK6Q9H5Y7 841 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 TRPV4Q9HBA0 871 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 RAPGEFL1Q9UHV5 662 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 CCL26Q9Y258 94 aa12.97□□□□□ -0.33
PTPRF-213ENST00000481019 NUP210Q8TEM1 1887 aaPredicted RBP12.97□□□□□ -0.33
PTPRF-213ENST00000481019 KRBA1A5PL33 1030 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 C2orf78A6NCI8 922 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 TRIM66O15016 1216 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 P4HA2O15460 535 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 SERPINC1P01008 464 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 EEF1GP26641 437 aaKnown RBP12.96□□□□□ -0.33
PTPRF-213ENST00000481019 CDC25CP30307 473 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 MTIF2P46199 727 aaKnown RBP12.96□□□□□ -0.33
PTPRF-213ENST00000481019 CCDC173Q0VFZ6 552 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 IFRD2Q12894 506 aaPredicted RBP12.96□□□□□ -0.33
PTPRF-213ENST00000481019 CLEC20AQ6ZU45 233 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 DENND5BQ6ZUT9 1274 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 MTSS1LQ765P7 747 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 PPM1KQ8N3J5 372 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 MAB21L3Q8N8X9 362 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 TFAP2BQ92481 460 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 NXPE3Q969Y0 559 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 JAKMIP2Q96AA8 810 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 ELSPBP1Q96BH3 223 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 CYFIP2Q96F07 1278 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 SMARCD1Q96GM5 515 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 TMEM176AQ96HP8 235 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 FAXDC2Q96IV6 333 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 HEXIM2Q96MH2 286 aaKnown RBP12.96□□□□□ -0.33
PTPRF-213ENST00000481019 NT5C1BQ96P26 610 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 CYP2S1Q96SQ9 504 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 C1QTNF1Q9BXJ1 281 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 HSD3B7Q9H2F3 369 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 TASP1Q9H6P5 420 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 CSNK1G1Q9HCP0 422 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 SIX2Q9NPC8 291 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 FANCLQ9NW38 375 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 CA14Q9ULX7 337 aa12.96□□□□□ -0.33
PTPRF-213ENST00000481019 SHISA7A6NL88 538 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 HEPACAM2A8MVW5 462 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 KCNJ18B7U540 433 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 TULP2O00295 520 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 FGF19O95750 216 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 SRFP11831 508 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 NPR3P17342 541 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 ANXA13P27216 316 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 SLC5A3P53794 718 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 TAF10Q12962 218 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 KCNJ12Q14500 433 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 NCAPHQ15003 741 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 CDKAL1Q5VV42 579 aa12.95□□□□□ -0.34
PTPRF-213ENST00000481019 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms