RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 TADA3O75528 432 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 SMC2O95347 1197 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 ABL1P00519 1130 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 HLA-DRAP01903 254 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 C4BPAP04003 597 aaKnown RBP8.83□□□□□ -1
ERCC8-205ENST00000477893 CKMP06732 381 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 PTPN1P18031 435 aaKnown RBP8.83□□□□□ -1
ERCC8-205ENST00000477893 CD58P19256 250 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 ATICP31939 592 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 VAMP7P51809 220 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 STARD6P59095 220 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 USP46P62068 366 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 PRKCQQ04759 706 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 TNK2Q07912 1038 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 ADAM9Q13443 819 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 KCNB1Q14721 858 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 CFAP221Q4G0U5 840 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 DCAF17Q5H9S7 520 aaPredicted RBP8.83□□□□□ -1
ERCC8-205ENST00000477893 C1orf220Q5T0J3 134 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 TRIM68Q6AZZ1 485 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 PHLDB3Q6NSJ2 640 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 FAM171BQ6P995 826 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 ZNF852Q6ZMS4 543 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 SV2AQ7L0J3 742 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 LIMS2Q7Z4I7 341 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 TMEM150AQ86TG1 271 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 ACOT1Q86TX2 421 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 MFSD6LQ8IWD5 586 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 GUF1Q8N442 669 aaKnown RBP8.83□□□□□ -1
ERCC8-205ENST00000477893 B3GALNT2Q8NCR0 500 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 MYCBPAPQ8TBZ2 947 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 SPATA18Q8TC71 538 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 DEPDC1BQ8WUY9 529 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 DNASE1L2Q92874 299 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 SMARCE1Q969G3 411 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 JAKMIP2Q96AA8 810 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 BCO2Q9BYV7 579 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 GPR88Q9GZN0 384 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 TRPV4Q9HBA0 871 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 ABCB6Q9NP58 842 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 RMND1Q9NWS8 449 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 GTSE1Q9NYZ3 720 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 HMGXB4Q9UGU5 601 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 TRAF3IP3Q9Y228 551 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 R4GN57 208 aa8.83□□□□□ -1
ERCC8-205ENST00000477893 ZFHX2Q9C0A1 2572 aaPredicted RBP8.82□□□□□ -1
ERCC8-205ENST00000477893 TICRRQ7Z2Z1 1910 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 C2orf78A6NCI8 922 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 TRIM49BA6NDI0 452 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 BIN1O00499 593 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 SCAMP3O14828 347 aaKnown RBP8.82□□□□□ -1
ERCC8-205ENST00000477893 TRIM66O15016 1216 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 AXIN1O15169 862 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 KINO60870 393 aaKnown RBP8.82□□□□□ -1
ERCC8-205ENST00000477893 TACC1O75410 805 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 NOL4O94818 638 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 F11P03951 625 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 P4HA1P13674 534 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 CCDC130P13994 396 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 CCNE1P24864 410 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 RPL13P26373 211 aaKnown RBP8.82□□□□□ -1
ERCC8-205ENST00000477893 PSMC2P35998 433 aaKnown RBP8.82□□□□□ -1
ERCC8-205ENST00000477893 PRCPP42785 496 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 NDST1P52848 882 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 AP3M2P53677 418 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 PPP3CAQ08209 521 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 MAPRE1Q15691 268 aaKnown RBP8.82□□□□□ -1
ERCC8-205ENST00000477893 ZACNQ401N2 412 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 TCERG1LQ5VWI1 586 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 KLHL10Q6JEL2 608 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 TSSK4Q6SA08 328 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 INTS8Q75QN2 995 aaKnown RBP8.82□□□□□ -1
ERCC8-205ENST00000477893 CMTM8Q8IZV2 173 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 ENGASEQ8NFI3 743 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 RIN3Q8TB24 985 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 BPIFB1Q8TDL5 484 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 TAS1R2Q8TE23 839 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 FAM3CQ92520 227 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 USP13Q92995 863 aaPredicted RBP8.82□□□□□ -1
ERCC8-205ENST00000477893 FUBP3Q96I24 572 aaKnown RBP eCLIP8.82□□□□□ -1
ERCC8-205ENST00000477893 SLC22A12Q96S37 553 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 CYP2S1Q96SQ9 504 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 TSG101Q99816 390 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 B3GNT5Q9BYG0 378 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 IMPG2Q9BZV3 1241 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 FAM49BQ9NUQ9 324 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 UXTQ9UBK9 157 aaPredicted RBP8.82□□□□□ -1
ERCC8-205ENST00000477893 PCDHA5Q9Y5H7 936 aa8.82□□□□□ -1
ERCC8-205ENST00000477893 CACNA1HO95180 2353 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 PIEZO1Q92508 2521 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 TRAV19A0A0A6YYK7 116 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 ARNTLO00327 626 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 CETN3O15182 167 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 CHADO15335 359 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 AP1G2O75843 785 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 STAU1O95793 577 aaKnown RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 EPB41P11171 864 aaKnown RBP8.81□□□□□ -1
ERCC8-205ENST00000477893 ARSAP15289 507 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 ADORA2BP29275 332 aa8.81□□□□□ -1
ERCC8-205ENST00000477893 MAGEA11P43364 429 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms