RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 SMYD4Q8IYR2 804 aaPredicted RBP12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 CMTM8Q8IZV2 173 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 CELF5Q8N6W0 485 aaKnown RBP12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 B3GALNT2Q8NCR0 500 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 CCDC150Q8NCX0 1101 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 ENGASEQ8NFI3 743 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 BPIFB1Q8TDL5 484 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 SMARCE1Q969G3 411 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 MSANTD3Q96H12 275 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 TNIP3Q96KP6 325 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 SPATA17Q96L03 361 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 MYRFLQ96LU7 910 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 TSG101Q99816 390 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 GTPBP4Q9BZE4 634 aaKnown RBP12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 ELOVL4Q9GZR5 314 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 SMYD3Q9H7B4 428 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 CIZ1Q9ULV3 898 aaPredicted RBP12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 NME7Q9Y5B8 376 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 PIAS3Q9Y6X2 628 aa12.14□□□□□ -0.47
NUDCD3-206ENST00000475952 FAM170BA6NMN3 283 aa12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 LRRN2O75325 713 aa12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 PRAMEF12O95522 483 aa12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 PTPN1P18031 435 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 CD72P21854 359 aa12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 SDHBP21912 280 aa12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 TARSP26639 723 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 RAP1GAPP47736 663 aa12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 COBLL1Q53SF7 1204 aa12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 MAB21L3Q8N8X9 362 aa12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 RSPRY1Q96DX4 576 aa12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 SLC46A2Q9BY10 475 aa12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 DPEP3Q9H4B8 488 aa12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 THG1LQ9NWX6 298 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 NCDNQ9UBB6 729 aa12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 ZFYVE26Q68DK2 2539 aa12.13□□□□□ -0.47
NUDCD3-206ENST00000475952 EML5Q05BV3 1969 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 TRAV19A0A0A6YYK7 116 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 ARNTLO00327 626 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 CETN3O15182 167 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 TADA3O75528 432 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 ASS1P00966 412 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 HLA-DRAP01903 254 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 CKMP06732 381 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 TRIM49P0CI25 452 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 TRIM49CP0CI26 452 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 EPB41P11171 864 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 PRCPP42785 496 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 GCLMP48507 274 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 PDE6CP51160 858 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 KPNA1P52294 538 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 MLLT6P55198 1093 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 STIM1Q13586 685 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 ZNF268Q14587 947 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 ZNF528Q3MIS6 628 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 TXNDC8Q6A555 127 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 MON1AQ86VX9 555 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 GPIHBP1Q8IV16 184 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 C8orf48Q96LL4 319 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 SMG9Q9H0W8 520 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 C8orf33Q9H7E9 229 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 MMRN2Q9H8L6 949 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 TRPC7Q9HCX4 862 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 TDP1Q9NUW8 608 aa12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 CDV3Q9UKY7 258 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-206ENST00000475952 MYO18AQ92614 2054 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 F8VP50 259 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 STX10O60499 249 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 ADRB1P08588 477 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 USP17L7P0C7H9 530 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 PFKLP17858 780 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 GTF2H1P32780 548 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 PPP1R2P41236 205 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 ASPAP45381 313 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 RPS9P46781 194 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 PPP3CCP48454 512 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 MXI1P50539 228 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 CDH8P55286 799 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 NOP14P78316 857 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 LRRC63Q05C16 580 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 C1orf220Q5T0J3 134 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 KRT39Q6A163 491 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 UNC93AQ86WB7 457 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 ELOA2Q8IYF1 753 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 GPR161Q8N6U8 529 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 SPATA20Q8TB22 786 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 FAM3CQ92520 227 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 USP13Q92995 863 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 SMARCD1Q96GM5 515 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 ZFYVE19Q96K21 471 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 IER2Q9BTL4 223 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 MED10Q9BTT4 135 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 ZNF518BQ9C0D4 1074 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 DNAI2Q9GZS0 605 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 TMEM8AQ9HCN3 771 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 SPATA6Q9NWH7 488 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 NDRG2Q9UN36 371 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 MTF2Q9Y483 593 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 PCDHA5Q9Y5H7 936 aa12.11□□□□□ -0.47
NUDCD3-206ENST00000475952 DCDC2BA2VCK2 349 aa12.1□□□□□ -0.47
NUDCD3-206ENST00000475952 PRR5-ARHGAP8B1AHC4 643 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms