RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CUL2Q13617 745 aa15.08■□□□□ 0
VAMP4-203ENST00000474047 TMEM150AQ86TG1 271 aa15.08■□□□□ 0
VAMP4-203ENST00000474047 TRIM59Q8IWR1 403 aa15.08■□□□□ 0
VAMP4-203ENST00000474047 FUKQ8N0W3 1084 aa15.08■□□□□ 0
VAMP4-203ENST00000474047 CELF5Q8N6W0 485 aaKnown RBP15.08■□□□□ 0
VAMP4-203ENST00000474047 GPT2Q8TD30 523 aa15.08■□□□□ 0
VAMP4-203ENST00000474047 TWNKQ96RR1 684 aa15.08■□□□□ 0
VAMP4-203ENST00000474047 SMG9Q9H0W8 520 aaKnown RBP15.08■□□□□ 0
VAMP4-203ENST00000474047 TBC1D17Q9HA65 648 aa15.08■□□□□ 0
VAMP4-203ENST00000474047 MYH10P35580 1976 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 PTPRDP23468 1912 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 KRBA1A5PL33 1030 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 CKMP06732 381 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 USP17L7P0C7H9 530 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 YWHAQP27348 245 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 AVPR2P30518 371 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 MTIF2P46199 727 aaKnown RBP15.07■□□□□ 0
VAMP4-203ENST00000474047 PPP3CCP48454 512 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 PDE6CP51160 858 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 CLCN5P51795 746 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 MARSP56192 900 aaKnown RBP15.07■□□□□ 0
VAMP4-203ENST00000474047 MAP3K7CLP57077 242 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 USP46P62068 366 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 MLF2Q15773 248 aaPredicted RBP15.07■□□□□ 0
VAMP4-203ENST00000474047 DPCR1Q3MIW9 517 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 FAM114A1Q8IWE2 563 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 CSGALNACT1Q8TDX6 532 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 JAKMIP2Q96AA8 810 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 TMEM176AQ96HP8 235 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 CNOT6LQ96LI5 555 aaKnown RBP15.07■□□□□ 0
VAMP4-203ENST00000474047 ARID3AQ99856 593 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 FAM124BQ9H5Z6 455 aaPredicted RBP15.07■□□□□ 0
VAMP4-203ENST00000474047 TDP1Q9NUW8 608 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 OBP2AQ9NY56 170 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 RAPGEFL1Q9UHV5 662 aa15.07■□□□□ 0
VAMP4-203ENST00000474047 ZNF638Q14966 1978 aaKnown RBP15.07■□□□□ 0
VAMP4-203ENST00000474047 PMM2O15305 246 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 ERCC5P28715 1186 aaPredicted RBP15.06■□□□□ 0
VAMP4-203ENST00000474047 WEE1P30291 646 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 TAF10Q12962 218 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 CC2D1AQ6P1N0 951 aaPredicted RBP15.06■□□□□ 0
VAMP4-203ENST00000474047 SASS6Q6UVJ0 657 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 PAQR9Q6ZVX9 377 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 PPM1KQ8N3J5 372 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 BPIFB1Q8TDL5 484 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 WHAMMQ8TF30 809 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 DNASE1L2Q92874 299 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 FBXO32Q969P5 355 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 HNRNPABQ99729 332 aaKnown RBP15.06■□□□□ 0
VAMP4-203ENST00000474047 TTLL2Q9BWV7 592 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 PRAMEF12O95522 483 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 HDCP19113 662 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 VCPP55072 806 aaKnown RBP15.06■□□□□ 0
VAMP4-203ENST00000474047 SLC8A3P57103 927 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 PRKCQQ04759 706 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 ARHGAP29Q52LW3 1261 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 EHBP1Q8NDI1 1231 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 PDZD8Q8NEN9 1154 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 RSPRY1Q96DX4 576 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 CYP2S1Q96SQ9 504 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 SMOQ99835 787 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 THAP9Q9H5L6 903 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 KIF9Q9HAQ2 790 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 HEBP1Q9NRV9 189 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 TMEM30AQ9NV96 361 aa15.06■□□□□ 0
VAMP4-203ENST00000474047 CHADO15335 359 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 TADA3O75528 432 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 CD19P15391 556 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 NPR3P17342 541 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 KPNA1P52294 538 aaPredicted RBP15.05■□□□□ -0
VAMP4-203ENST00000474047 SLC5A3P53794 718 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 RAD23BP54727 409 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 PPP1R26Q5T8A7 1209 aaPredicted RBP15.05■□□□□ -0
VAMP4-203ENST00000474047 PHLDB3Q6NSJ2 640 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 TPRG1Q6ZUI0 275 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 ARL14EPQ8N8R7 260 aaPredicted RBP15.05■□□□□ -0
VAMP4-203ENST00000474047 SCAMP5Q8TAC9 235 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 USP13Q92995 863 aaPredicted RBP15.05■□□□□ -0
VAMP4-203ENST00000474047 PRRX2Q99811 253 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 FBXO44Q9H4M3 255 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 COMMD8Q9NX08 183 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 SIT1Q9Y3P8 196 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 PCDHB4Q9Y5E5 795 aa15.05■□□□□ -0
VAMP4-203ENST00000474047 TRIOO75962 3097 aa15.04■□□□□ -0
VAMP4-203ENST00000474047 GREB1Q4ZG55 1949 aa15.04■□□□□ -0
VAMP4-203ENST00000474047 DENND4CQ5VZ89 1909 aa15.04■□□□□ -0
VAMP4-203ENST00000474047 C2orf78A6NCI8 922 aa15.04■□□□□ -0
VAMP4-203ENST00000474047 AOC1P19801 751 aa15.04■□□□□ -0
VAMP4-203ENST00000474047 STARD6P59095 220 aa15.04■□□□□ -0
VAMP4-203ENST00000474047 PLCB2Q00722 1185 aa15.04■□□□□ -0
VAMP4-203ENST00000474047 FCHO2Q0JRZ9 810 aa15.04■□□□□ -0
VAMP4-203ENST00000474047 UBXN2BQ14CS0 331 aa15.04■□□□□ -0
VAMP4-203ENST00000474047 SGO2Q562F6 1265 aa15.04■□□□□ -0
VAMP4-203ENST00000474047 CT47A1Q5JQC4 288 aaPredicted RBP15.04■□□□□ -0
VAMP4-203ENST00000474047 SLC4A11Q8NBS3 891 aa15.04■□□□□ -0
VAMP4-203ENST00000474047 CSNK1G1Q9HCP0 422 aa15.04■□□□□ -0
VAMP4-203ENST00000474047 CHORDC1Q9UHD1 332 aaPredicted RBP15.04■□□□□ -0
VAMP4-203ENST00000474047 CCL26Q9Y258 94 aa15.04■□□□□ -0
VAMP4-203ENST00000474047 MRPS17Q9Y2R5 130 aaKnown RBP15.04■□□□□ -0
VAMP4-203ENST00000474047 NUP210Q8TEM1 1887 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms