RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 CYP2W1Q8TAV3 490 aa3.91□□□□□ -1.78
COPS3-206ENST00000471414 RITA1Q96K30 269 aa3.91□□□□□ -1.78
COPS3-206ENST00000471414 ZC3H10Q96K80 434 aaKnown RBP3.91□□□□□ -1.78
COPS3-206ENST00000471414 SNX18Q96RF0 628 aa3.91□□□□□ -1.78
COPS3-206ENST00000471414 C22orf23Q9BZE7 217 aa3.91□□□□□ -1.78
COPS3-206ENST00000471414 L1RE1Q9UN81 338 aa3.91□□□□□ -1.78
COPS3-206ENST00000471414 SNX14Q9Y5W7 946 aa3.91□□□□□ -1.78
COPS3-206ENST00000471414 A0A1W2PPL8 197 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 FAM227AF5H4B4 570 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 PPP6CO00743 305 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 PRKCBP05771 671 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 KITP10721 976 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 KELP23276 732 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 TPTEP56180 551 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 KLF9Q13886 244 aaPredicted RBP3.9□□□□□ -1.79
COPS3-206ENST00000471414 NFE2Q16621 373 aaPredicted RBP3.9□□□□□ -1.79
COPS3-206ENST00000471414 SRSF7Q16629 238 aaKnown RBP eCLIP3.9□□□□□ -1.79
COPS3-206ENST00000471414 LY6KQ17RY6 165 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 PLA1AQ53H76 456 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 RNASE12Q5GAN4 147 aaKnown RBP3.9□□□□□ -1.79
COPS3-206ENST00000471414 DEPDC1Q5TB30 811 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 GALNT16Q8N428 558 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 LRRC71Q8N4P6 559 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 OR6B3Q8NGW1 331 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 OSCP1Q8WVF1 389 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 CTHRC1Q96CG8 243 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 LRGUKQ96M69 825 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 SLC29A3Q9BZD2 475 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 ZNF518BQ9C0D4 1074 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 STK32BQ9NY57 414 aa3.9□□□□□ -1.79
COPS3-206ENST00000471414 KAT6AQ92794 2004 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 TCRBV5S1A1TA0A578 114 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 TRIM43BA6NCK2 446 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 A6NNZ2 444 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 TMEM233B4DJY2 109 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 MYO1CO00159 1063 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 PRPF3O43395 683 aaKnown RBP3.89□□□□□ -1.79
COPS3-206ENST00000471414 TOP3BO95985 862 aaKnown RBP3.89□□□□□ -1.79
COPS3-206ENST00000471414 BCAT1P54687 386 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 SLC13A2Q13183 592 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 DAZAP2Q15038 168 aaPredicted RBP3.89□□□□□ -1.79
COPS3-206ENST00000471414 PLEKHG6Q3KR16 790 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 TBC1D25Q3MII6 688 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 SUPT20HL1Q3ZLR7 823 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 FAM102BQ5T8I3 360 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 SLC9A4Q6AI14 798 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 FCRL6Q6DN72 434 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 APOA5Q6Q788 366 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 NAPRTQ6XQN6 538 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 YTHDF3Q7Z739 585 aaKnown RBP3.89□□□□□ -1.79
COPS3-206ENST00000471414 C9orf106Q8NAJ2 232 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 ABHD11Q8NFV4 315 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 OR56A3Q8NH54 315 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 BPIFB1Q8TDL5 484 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 TRIM43Q96BQ3 446 aaPredicted RBP3.89□□□□□ -1.79
COPS3-206ENST00000471414 ASB2Q96Q27 587 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 PRR25Q96S07 402 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 QTRT1Q9BXR0 403 aaKnown RBP3.89□□□□□ -1.79
COPS3-206ENST00000471414 TRIM5Q9C035 493 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 ASIC5Q9NY37 505 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 DNMT3BQ9UBC3 853 aaKnown RBP3.89□□□□□ -1.79
COPS3-206ENST00000471414 PAXBP1Q9Y5B6 917 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 CDY1Q9Y6F8 540 aa3.89□□□□□ -1.79
COPS3-206ENST00000471414 CYP2D7A0A087X1C5 515 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 MBD3L4A6NDZ8 208 aaPredicted RBP3.88□□□□□ -1.79
COPS3-206ENST00000471414 MBD3L3A6NE82 208 aaPredicted RBP3.88□□□□□ -1.79
COPS3-206ENST00000471414 CAPN8A6NHC0 703 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 SMIM22K7EJ46 135 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 M0R3H8 397 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 CCP110O43303 1012 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 MOSPD3O75425 235 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 VNN1O95497 513 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 CHRM5P08912 532 aaPredicted RBP3.88□□□□□ -1.79
COPS3-206ENST00000471414 DLDP09622 509 aaKnown RBP3.88□□□□□ -1.79
COPS3-206ENST00000471414 U2AF1L5P0DN76 240 aaPredicted RBP3.88□□□□□ -1.79
COPS3-206ENST00000471414 MPGP29372 298 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 PDE1AP54750 535 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 U2AF1Q01081 240 aaKnown RBP eCLIP3.88□□□□□ -1.79
COPS3-206ENST00000471414 SATB1Q01826 763 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 KRT17Q04695 432 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 RAB32Q13637 225 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 PTCHD3Q3KNS1 767 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 ODR4Q5SWX8 454 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 CERCAMQ5T4B2 595 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 DCAF12L1Q5VU92 463 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 SLC18B1Q6NT16 456 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 CAND1Q86VP6 1230 aaKnown RBP3.88□□□□□ -1.79
COPS3-206ENST00000471414 TCEAL8Q8IYN2 117 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 LINC01465Q8N7H1 131 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 TERB1Q8NA31 727 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 ZNF398Q8TD17 642 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 XAGE5Q8WWM1 108 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 NMD3Q96D46 503 aaKnown RBP3.88□□□□□ -1.79
COPS3-206ENST00000471414 DAZAP1Q96EP5 407 aaKnown RBP3.88□□□□□ -1.79
COPS3-206ENST00000471414 SUCLG2Q96I99 432 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 ZNF48Q96MX3 618 aaPredicted RBP3.88□□□□□ -1.79
COPS3-206ENST00000471414 PRSS22Q9GZN4 317 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 MS4A7Q9GZW8 240 aaPredicted RBP3.88□□□□□ -1.79
COPS3-206ENST00000471414 A1CFQ9NQ94 594 aaKnown RBP3.88□□□□□ -1.79
COPS3-206ENST00000471414 TRMT13Q9NUP7 481 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms