RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 ARNTL2Q8WYA1 636 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 KCTD13Q8WZ19 329 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 ZNF707Q96C28 371 aaPredicted RBP10.47□□□□□ -0.73
SF3A1-207ENST00000471342 MCRS1Q96EZ8 462 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 FUBP3Q96I24 572 aaKnown RBP eCLIP10.47□□□□□ -0.73
SF3A1-207ENST00000471342 TNIP3Q96KP6 325 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 C8orf48Q96LL4 319 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 DESI2Q9BSY9 194 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 C11orf84Q9BUA3 381 aaPredicted RBP10.47□□□□□ -0.73
SF3A1-207ENST00000471342 ZNF576Q9H609 170 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 IL21Q9HBE4 155 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 ABCB6Q9NP58 842 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 TLR9Q9NR96 1032 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 OSER1Q9NX31 292 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 TRIM10Q9UDY6 481 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 AFF4Q9UHB7 1163 aaKnown RBP10.47□□□□□ -0.73
SF3A1-207ENST00000471342 TMEM59LQ9UK28 342 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 FBXW11Q9UKB1 542 aa10.47□□□□□ -0.73
SF3A1-207ENST00000471342 ARHGEF37A1IGU5 675 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 F8VP50 259 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 H7C4K7 107 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 XPO1O14980 1071 aaKnown RBP10.46□□□□□ -0.73
SF3A1-207ENST00000471342 PER2O15055 1255 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 GJB6O95452 261 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 LSM8O95777 96 aaKnown RBP10.46□□□□□ -0.73
SF3A1-207ENST00000471342 FTLP02792 175 aaPredicted RBP10.46□□□□□ -0.73
SF3A1-207ENST00000471342 CYP1A2P05177 515 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 CD19P15391 556 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 EPCAMP16422 314 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 NPR3P17342 541 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 ADORA2BP29275 332 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 DEKP35659 375 aaKnown RBP10.46□□□□□ -0.73
SF3A1-207ENST00000471342 GALCP54803 685 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 YWHAEP62258 255 aaKnown RBP10.46□□□□□ -0.73
SF3A1-207ENST00000471342 OGDHQ02218 1023 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 KRT17Q04695 432 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 C1QBPQ07021 282 aaKnown RBP10.46□□□□□ -0.73
SF3A1-207ENST00000471342 PDCLQ13371 301 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 TAF5Q15542 800 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 DDR2Q16832 855 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 CTC1Q2NKJ3 1217 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 RAB6CQ53S08 254 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 NAA35Q5VZE5 725 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 PLPP4Q5VZY2 271 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 ALKBH5Q6P6C2 394 aaKnown RBP10.46□□□□□ -0.73
SF3A1-207ENST00000471342 OLFML1Q6UWY5 402 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 HFE2Q6ZVN8 426 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 METTL23Q86XA0 190 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 TMC8Q8IU68 726 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 SCML4Q8N228 414 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 C17orf53Q8N3J3 647 aaPredicted RBP10.46□□□□□ -0.73
SF3A1-207ENST00000471342 ZNF397Q8NF99 534 aaPredicted RBP10.46□□□□□ -0.73
SF3A1-207ENST00000471342 SCAMP5Q8TAC9 235 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 TTLL2Q9BWV7 592 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 OXCT2Q9BYC2 517 aaPredicted RBP10.46□□□□□ -0.73
SF3A1-207ENST00000471342 RAB6CQ9H0N0 254 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 THAP2Q9H0W7 228 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 ZNF334Q9HCZ1 680 aaPredicted RBP10.46□□□□□ -0.73
SF3A1-207ENST00000471342 MRPL17Q9NRX2 175 aaKnown RBP10.46□□□□□ -0.73
SF3A1-207ENST00000471342 HSFX1Q9UBD0 423 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 MSRAQ9UJ68 235 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 MTCH2Q9Y6C9 303 aa10.46□□□□□ -0.73
SF3A1-207ENST00000471342 ATP8B3O60423 1300 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 E5RJQ4 531 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 LINC01565O15544 149 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 ARHGAP6O43182 974 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 ZDHHC11BP0C7U3 371 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 SPATA31D3P0C874 917 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 LTBRP36941 435 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 PDE6CP51160 858 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 MAP3K7CLP57077 242 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 BST2Q10589 180 aaKnown RBP10.45□□□□□ -0.74
SF3A1-207ENST00000471342 HYAL1Q12794 435 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 DUSP6Q16828 381 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 HS1BP3Q53T59 392 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 TPGS2Q68CL5 300 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 PLEKHA7Q6IQ23 1121 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 TMEM184AQ6ZMB5 413 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 SPATA31D4Q6ZUB0 917 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 CYP4V2Q6ZWL3 525 aaPredicted RBP10.45□□□□□ -0.74
SF3A1-207ENST00000471342 THEM5Q8N1Q8 247 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 JOSD2Q8TAC2 188 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 GPR152Q8TDT2 470 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 MRPL38Q96DV4 380 aaKnown RBP10.45□□□□□ -0.74
SF3A1-207ENST00000471342 SPATA17Q96L03 361 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 LMAN2LQ9H0V9 348 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 SLC28A3Q9HAS3 691 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 NMUR1Q9HB89 426 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 NGRNQ9NPE2 291 aaKnown RBP10.45□□□□□ -0.74
SF3A1-207ENST00000471342 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.45□□□□□ -0.74
SF3A1-207ENST00000471342 KRT82Q9NSB4 513 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 PCDHA13Q9Y5I0 950 aa10.45□□□□□ -0.74
SF3A1-207ENST00000471342 UNC80Q8N2C7 3258 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 TMEM265A0A087WTH1 108 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 I6L893 689 aaPredicted RBP10.44□□□□□ -0.74
SF3A1-207ENST00000471342 M0QYV0 167 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 RTN2O75298 545 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 AP1G2O75843 785 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 MTA2O94776 668 aa10.44□□□□□ -0.74
SF3A1-207ENST00000471342 URODP06132 367 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms