RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 PCDH9Q9HC56 1237 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 KCNK9Q9NPC2 374 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 UBN1Q9NPG3 1134 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 BTBD7Q9P203 1132 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 RGS17Q9UGC6 210 aaPredicted RBP8.41□□□□□ -1.06
SMC4-212ENST00000470240 LGALS13Q9UHV8 139 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 TPX2Q9ULW0 747 aaKnown RBP8.41□□□□□ -1.06
SMC4-212ENST00000470240 ACTL7BQ9Y614 415 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 IGKV6-21A0A0C4DH24 114 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 EXOC1LA0A1B0GW35 172 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 ANKRD65E5RJM6 399 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 CALCAP01258 141 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 ITGAVP06756 1048 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 TXNP10599 105 aaKnown RBP8.4□□□□□ -1.06
SMC4-212ENST00000470240 KRT3P12035 628 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 DRD4P21917 467 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 TNFSF9P41273 254 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 ARSEP51690 589 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 VCPP55072 806 aaKnown RBP8.4□□□□□ -1.06
SMC4-212ENST00000470240 ARL4CP56559 192 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 GSCP56915 257 aaPredicted RBP8.4□□□□□ -1.06
SMC4-212ENST00000470240 TAS2R40P59535 323 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 PSMC1P62191 440 aaKnown RBP8.4□□□□□ -1.06
SMC4-212ENST00000470240 ACTN3Q08043 901 aaPredicted RBP8.4□□□□□ -1.06
SMC4-212ENST00000470240 PPIL2Q13356 520 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 LAMC2Q13753 1193 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 ZNF268Q14587 947 aaPredicted RBP8.4□□□□□ -1.06
SMC4-212ENST00000470240 LONRF1Q17RB8 773 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 HIBCHQ6NVY1 386 aaPredicted RBP8.4□□□□□ -1.06
SMC4-212ENST00000470240 EFCAB12Q6NXP0 572 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 NT5DC4Q86YG4 428 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 CPNE8Q86YQ8 564 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 ZDHHC14Q8IZN3 488 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 CNPY4Q8N129 248 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 ALLCQ8N6M5 410 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 RSAD2Q8WXG1 361 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 ELMO3Q96BJ8 720 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 GRAMD1AQ96CP6 724 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 SGSM3Q96HU1 749 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 PRMT1Q99873 361 aaKnown RBP8.4□□□□□ -1.06
SMC4-212ENST00000470240 MAK16Q9BXY0 300 aaKnown RBP8.4□□□□□ -1.06
SMC4-212ENST00000470240 TRIM7Q9C029 511 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 HAPLN2Q9GZV7 340 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 FZD8Q9H461 694 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 ASB7Q9H672 318 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 VPS37BQ9H9H4 285 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 SAYSD1Q9NPB0 183 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 ASNSD1Q9NWL6 643 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 NINJ2Q9NZG7 142 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 KIAA1257Q9ULG3 409 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 FZD1Q9UP38 647 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 OTOFQ9HC10 1997 aa8.4□□□□□ -1.06
SMC4-212ENST00000470240 ZSWIM8A7E2V4 1837 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 TMEM120BA0PK00 339 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 SIGLEC16A6NMB1 481 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 DCDC2CA8MYV0 355 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 PI4K2BG5E9Z4 385 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 GOLGA8SH3BPF8 625 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 O00370 1275 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 MCF2LO15068 1137 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 GH1P01241 217 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 HOXC6P09630 235 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 WEE2P0C1S8 567 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 VDRP11473 427 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 BRAFP15056 766 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 TSHRP16473 764 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 PROZP22891 400 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 CHKAP35790 457 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 MAGEA4P43358 317 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 IFI35P80217 286 aaPredicted RBP8.39□□□□□ -1.07
SMC4-212ENST00000470240 GPS1Q13098 491 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 TFDP2Q14188 446 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 LLGL1Q15334 1064 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 TMED2Q15363 201 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 SEPT7Q16181 437 aaKnown RBP8.39□□□□□ -1.07
SMC4-212ENST00000470240 CNGA2Q16280 664 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 KYNUQ16719 465 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 FAM187BQ17R55 369 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 ZNF394Q53GI3 561 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 LACTB2Q53H82 288 aaPredicted RBP8.39□□□□□ -1.07
SMC4-212ENST00000470240 C2CD6Q53TS8 623 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 FAM47CQ5HY64 1035 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 CYP4F22Q6NT55 531 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 C6orf89Q6UWU4 347 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 FBXO16Q8IX29 292 aaPredicted RBP8.39□□□□□ -1.07
SMC4-212ENST00000470240 LRRC71Q8N4P6 559 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 ANKRD42Q8N9B4 389 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 MDM1Q8TC05 714 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.39□□□□□ -1.07
SMC4-212ENST00000470240 NKD2Q969F2 451 aaPredicted RBP8.39□□□□□ -1.07
SMC4-212ENST00000470240 SMC6Q96SB8 1091 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 DDX23Q9BUQ8 820 aaKnown RBP8.39□□□□□ -1.07
SMC4-212ENST00000470240 IFT122Q9HBG6 1241 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 VTA1Q9NP79 307 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 ITGA11Q9UKX5 1188 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 SMG5Q9UPR3 1016 aaKnown RBP8.39□□□□□ -1.07
SMC4-212ENST00000470240 KCNH4Q9UQ05 1017 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 AKT3Q9Y243 479 aa8.39□□□□□ -1.07
SMC4-212ENST00000470240 R3HDM2Q9Y2K5 976 aaKnown RBP8.39□□□□□ -1.07
SMC4-212ENST00000470240 NEU2Q9Y3R4 380 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms