RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 PTPN1P18031 435 aaKnown RBP10.7□□□□□ -0.7
MSH5-213ENST00000468136 ITIH2P19823 946 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 PTGIRP43119 386 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 CARSP49589 748 aaKnown RBP10.7□□□□□ -0.7
MSH5-213ENST00000468136 CDK7P50613 346 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 ZNF135P52742 658 aaPredicted RBP10.7□□□□□ -0.7
MSH5-213ENST00000468136 AIF1P55008 147 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 TAS2R40P59535 323 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 GABPB1Q06547 395 aaPredicted RBP10.7□□□□□ -0.7
MSH5-213ENST00000468136 PDE4CQ08493 712 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 TFDP2Q14188 446 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 SLMAPQ14BN4 828 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 TAZQ16635 292 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 UPP1Q16831 310 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 TUBB8Q3ZCM7 444 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 ZNF618Q5T7W0 954 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 OLFML1Q6UWY5 402 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 LRIG3Q6UXM1 1119 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 SPOCD1Q6ZMY3 1216 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 TTC30AQ86WT1 665 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 THEM5Q8N1Q8 247 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 SCML4Q8N228 414 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 UBA3Q8TBC4 463 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 FMO2Q99518 471 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 ACBD6Q9BR61 282 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 OXCT2Q9BYC2 517 aaPredicted RBP10.7□□□□□ -0.7
MSH5-213ENST00000468136 DCLK3Q9C098 648 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 PNPLA8Q9NP80 782 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 TRMT13Q9NUP7 481 aaKnown RBP10.7□□□□□ -0.7
MSH5-213ENST00000468136 HPCAL4Q9UM19 191 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 NFU1Q9UMS0 254 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 SCN1AP35498 2009 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 SRCAPQ6ZRS2 3230 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 TRIP11Q15643 1979 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 C9IYK1 514 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 F8VP50 259 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 MDM4O15151 490 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 FAM200BP0CF97 657 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 RALAP11233 206 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 ZFXP17010 805 aaPredicted RBP10.69□□□□□ -0.7
MSH5-213ENST00000468136 SSTR3P32745 418 aaPredicted RBP10.69□□□□□ -0.7
MSH5-213ENST00000468136 EIF3BP55884 814 aaKnown RBP10.69□□□□□ -0.7
MSH5-213ENST00000468136 CAP1Q01518 475 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 SLC25A11Q02978 314 aaKnown RBP10.69□□□□□ -0.7
MSH5-213ENST00000468136 ZNF252P-AS1Q0IIN9 211 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 PTK6Q13882 451 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 PPP1R7Q15435 360 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 C2CD6Q53TS8 623 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 PMF1Q6P1K2 205 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 FAM183BPQ6ZVS7 135 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 BBS12Q6ZW61 710 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 ZNF365Q70YC5 407 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 LRRC8DQ7L1W4 858 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 STRADAQ7RTN6 431 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 C12orf29Q8N999 325 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 PPP1R13LQ8WUF5 828 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 RXFP2Q8WXD0 754 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 NKD2Q969F2 451 aaPredicted RBP10.69□□□□□ -0.7
MSH5-213ENST00000468136 ZFP42Q96MM3 310 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 SYT15Q9BQS2 421 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 PAK6Q9NQU5 681 aaPredicted RBP10.69□□□□□ -0.7
MSH5-213ENST00000468136 TMEM161AQ9NX61 479 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 DDX43Q9NXZ2 648 aaKnown RBP10.69□□□□□ -0.7
MSH5-213ENST00000468136 STAP1Q9ULZ2 295 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 USP18Q9UMW8 372 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 TRIM17Q9Y577 477 aa10.69□□□□□ -0.7
MSH5-213ENST00000468136 hCG_1818297A0A087WSY0 165 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 LRRD1A4D1F6 860 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 GOLGA8KD6RF30 607 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 ZMYND10O75800 440 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 ENDOD1O94919 500 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 TRUB2O95900 331 aaKnown RBP10.68□□□□□ -0.7
MSH5-213ENST00000468136 ITGAVP06756 1048 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 PDGFRBP09619 1106 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 FGFR1P11362 822 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 KDELR1P24390 212 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 MIPP30301 263 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 CDKN2BP42772 138 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 SCNN1GP51170 649 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 TSPY1Q01534 308 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 OGDHQ02218 1023 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 WSCD1Q658N2 575 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 TRAF7Q6Q0C0 670 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 C4orf22Q6V702 233 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 BEND5Q7L4P6 421 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 PCGF5Q86SE9 256 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 PHLDB2Q86SQ0 1253 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 KCTD6Q8NC69 237 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 ZNF784Q8NCA9 323 aaPredicted RBP10.68□□□□□ -0.7
MSH5-213ENST00000468136 JOSD2Q8TAC2 188 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 MYCBPAPQ8TBZ2 947 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 SLC2A14Q8TDB8 520 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 IRGQQ8WZA9 623 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 SEPT8Q92599 483 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 CENPIQ92674 756 aaPredicted RBP10.68□□□□□ -0.7
MSH5-213ENST00000468136 SMARCD1Q96GM5 515 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 SUSD3Q96L08 255 aa10.68□□□□□ -0.7
MSH5-213ENST00000468136 DDX23Q9BUQ8 820 aaKnown RBP10.68□□□□□ -0.7
MSH5-213ENST00000468136 MAK16Q9BXY0 300 aaKnown RBP10.68□□□□□ -0.7
MSH5-213ENST00000468136 PHACTR1Q9C0D0 580 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms