RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 TBKBP1A7MCY6 615 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 NRP1O14786 923 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 SLC8A3P57103 927 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 MRPS25P82663 173 aaKnown RBP21.65■■□□□ 1.06
TMEM53-207ENST00000468117 SEL1L2Q5TEA6 688 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 CLEC4CQ8WTT0 213 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 TMEM209Q96SK2 561 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 PARD6BQ9BYG5 372 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 ARHGEF37A1IGU5 675 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 TRIM43BA6NCK2 446 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 KRIT1O00522 736 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 PSTPIP1O43586 416 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 TADA2AO75478 443 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 FAM200BP0CF97 657 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 TYMPP19971 482 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 RPL34P49207 117 aaKnown RBP21.65■■□□□ 1.06
TMEM53-207ENST00000468117 BCAR1P56945 870 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 SNX16P57768 344 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 SLC6A3Q01959 620 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 YWHAHQ04917 246 aaPredicted RBP21.65■■□□□ 1.06
TMEM53-207ENST00000468117 INTS6LQ5JSJ4 861 aaKnown RBP21.65■■□□□ 1.06
TMEM53-207ENST00000468117 TRNP1Q6NT89 227 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 FAM35AQ86V20 835 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 TRIM43Q96BQ3 446 aaPredicted RBP21.65■■□□□ 1.06
TMEM53-207ENST00000468117 PNKPQ96T60 521 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 LRRC1Q9BTT6 524 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 LTBP2Q14767 1821 aa21.65■■□□□ 1.06
TMEM53-207ENST00000468117 FLT3P36888 993 aa21.64■■□□□ 1.05
TMEM53-207ENST00000468117 MAP3K7CLP57077 242 aa21.64■■□□□ 1.05
TMEM53-207ENST00000468117 LLGL1Q15334 1064 aa21.64■■□□□ 1.05
TMEM53-207ENST00000468117 THEM5Q8N1Q8 247 aa21.64■■□□□ 1.05
TMEM53-207ENST00000468117 MYLPFQ96A32 169 aa21.64■■□□□ 1.05
TMEM53-207ENST00000468117 HSFY1Q96LI6 401 aa21.64■■□□□ 1.05
TMEM53-207ENST00000468117 RHOBTB2Q9BYZ6 727 aa21.64■■□□□ 1.05
TMEM53-207ENST00000468117 TMEM30AQ9NV96 361 aa21.64■■□□□ 1.05
TMEM53-207ENST00000468117 NR2E1Q9Y466 385 aa21.64■■□□□ 1.05
TMEM53-207ENST00000468117 AP1G2O75843 785 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 TIMP1P01033 207 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 RABGGTBP53611 331 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 CACNA2D1P54289 1103 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 ATP13A4Q4VNC1 1196 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 FAM171BQ6P995 826 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 ARFGAP1Q8N6T3 406 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 KHSRPQ92945 711 aaKnown RBP eCLIP21.63■■□□□ 1.05
TMEM53-207ENST00000468117 KRT12Q99456 494 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 MRPL9Q9BYD2 267 aaKnown RBP21.63■■□□□ 1.05
TMEM53-207ENST00000468117 CYLDQ9NQC7 956 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 TMLHEQ9NVH6 421 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 ADAM28Q9UKQ2 775 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 C2CD4BA6NLJ0 364 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 TRAPPC3O43617 180 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 LRCH4O75427 683 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 ALDH2P05091 517 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 CSF2RAP15509 400 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 RFC2P35250 354 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 PBX3P40426 434 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 ACADSBP45954 432 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 SLC11A1P49279 550 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 ADIGQ0VDE8 80 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 TXNRD3NBQ6F5E7 133 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 FBXO38Q6PIJ6 1188 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 LRRTM3Q86VH5 581 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 ZDHHC17Q8IUH5 632 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 KLHL7Q8IXQ5 586 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 RXFP2Q8WXD0 754 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 KCNK16Q96T55 309 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 NAP1L3Q99457 506 aaPredicted RBP21.63■■□□□ 1.05
TMEM53-207ENST00000468117 SMOQ99835 787 aa21.63■■□□□ 1.05
TMEM53-207ENST00000468117 PDGFRAP16234 1089 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 GPD1P21695 349 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 ZNF143P52747 638 aaPredicted RBP21.62■■□□□ 1.05
TMEM53-207ENST00000468117 HDAC7Q8WUI4 952 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 PKMYT1Q99640 499 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 KLHL11Q9NVR0 708 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 MARCH5Q9NX47 278 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 FAN1Q9Y2M0 1017 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 NT5C1B-RDH14C9J2C7 533 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 SH3PXD2AQ5TCZ1 1133 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 C8orf74Q6P047 294 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 KATNAL2Q8IYT4 538 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 SMARCD1Q96GM5 515 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 HINFPQ9BQA5 517 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 PLVAPQ9BX97 442 aa21.62■■□□□ 1.05
TMEM53-207ENST00000468117 DDX47Q9H0S4 455 aaKnown RBP21.62■■□□□ 1.05
TMEM53-207ENST00000468117 TCRBV7S2A1N4TA0A589 114 aa21.61■■□□□ 1.05
TMEM53-207ENST00000468117 RAG1P15918 1043 aa21.61■■□□□ 1.05
TMEM53-207ENST00000468117 TSPY1Q01534 308 aa21.61■■□□□ 1.05
TMEM53-207ENST00000468117 C15orf59Q2T9L4 293 aaPredicted RBP21.61■■□□□ 1.05
TMEM53-207ENST00000468117 SLC13A5Q86YT5 568 aaPredicted RBP21.61■■□□□ 1.05
TMEM53-207ENST00000468117 CCDC50Q8IVM0 306 aa21.61■■□□□ 1.05
TMEM53-207ENST00000468117 LRRC43Q8N309 656 aa21.61■■□□□ 1.05
TMEM53-207ENST00000468117 ZMIZ2Q8NF64 920 aa21.61■■□□□ 1.05
TMEM53-207ENST00000468117 CFAP57Q96MR6 1250 aa21.61■■□□□ 1.05
TMEM53-207ENST00000468117 GPR62Q9BZJ7 368 aa21.61■■□□□ 1.05
TMEM53-207ENST00000468117 KIAA0355O15063 1070 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 GALTP07902 379 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 H2AFXP16104 143 aaPredicted RBP21.6■■□□□ 1.05
TMEM53-207ENST00000468117 BDNFP23560 247 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 NDUFV1P49821 464 aa21.6■■□□□ 1.05
TMEM53-207ENST00000468117 RBM10P98175 930 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms