RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 TTC9BQ8N6N2 239 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 KCTD13Q8WZ19 329 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 HSFY1Q96LI6 401 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 C8orf48Q96LL4 319 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 CPXM1Q96SM3 734 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 KCNK16Q96T55 309 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 PACSIN1Q9BY11 444 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 LACRTQ9GZZ8 138 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 LMAN2LQ9H0V9 348 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 CERS4Q9HA82 394 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 KRT82Q9NSB4 513 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 TJP2Q9UDY2 1190 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 ZKSCAN5Q9Y2L8 839 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 PPP2R2CQ9Y2T4 447 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 CEP83Q9Y592 693 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 LAMA3Q16787 3333 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 A0A0U1RQJ8 604 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 TCRBV5S1A1TA0A578 114 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 ANKRD62A6NC57 917 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 TMCO5BA8MYB1 307 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 H2AFZP0C0S5 128 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 NSFP46459 744 aaKnown RBP15.15■□□□□ 0.02
COL6A1-202ENST00000463060 VAV2P52735 878 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 MAP3K7CLP57077 242 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 DUSP4Q13115 394 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 H2AFVQ71UI9 128 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 PIGZQ86VD9 579 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 ERICH1Q86X53 443 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 TCEAL8Q8IYN2 117 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 ATRIPQ8WXE1 791 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 ARNTL2Q8WYA1 636 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 TRIM44Q96DX7 344 aaPredicted RBP15.15■□□□□ 0.02
COL6A1-202ENST00000463060 PPP1R13BQ96KQ4 1090 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 PGLYRP2Q96PD5 576 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 PNPLA8Q9NP80 782 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 ABI2Q9NYB9 513 aaPredicted RBP15.15■□□□□ 0.02
COL6A1-202ENST00000463060 ADAM22Q9P0K1 906 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 TFR2Q9UP52 801 aa15.15■□□□□ 0.02
COL6A1-202ENST00000463060 ATG2AQ2TAZ0 1938 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-202ENST00000463060 F8VP50 259 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 ABL1P00519 1130 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 ERBB2P04626 1255 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 CYP1A2P05177 515 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 CCDC175P0C221 793 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 TMEM253P0C7T8 217 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 ARHGAP25P42331 645 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 GSCP56915 257 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-202ENST00000463060 ADCY1Q08828 1119 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 ZNF268Q14587 947 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-202ENST00000463060 TCEAL1Q15170 157 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 PLPP4Q5VZY2 271 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 MMS22LQ6ZRQ5 1243 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 MCRS1Q96EZ8 462 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 CEP295NLQ96MC4 621 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 THAP2Q9H0W7 228 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 DMAP1Q9NPF5 467 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-202ENST00000463060 AVENQ9NQS1 362 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-202ENST00000463060 ENTPD7Q9NQZ7 604 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 IL37Q9NZH6 218 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 SLC27A5Q9Y2P5 690 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 NCANO14594 1321 aa15.14■□□□□ 0.01
COL6A1-202ENST00000463060 MYO7AQ13402 2215 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 BTNL10A8MVZ5 291 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 E5RJQ4 531 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 TGM5O43548 720 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 ADH1AP07327 375 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 ACADSBP45954 432 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 RGS7P49802 495 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 GPC5P78333 572 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 DDR2Q16832 855 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 C2CD6Q53TS8 623 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 PLEKHA7Q6IQ23 1121 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 GPRIN1Q7Z2K8 1008 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 XYLT1Q86Y38 959 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 CCAR2Q8N163 923 aaKnown RBP15.13■□□□□ 0.01
COL6A1-202ENST00000463060 SCML4Q8N228 414 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 GDPD5Q8WTR4 605 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 SLC22A17Q8WUG5 538 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 KHSRPQ92945 711 aaKnown RBP eCLIP15.13■□□□□ 0.01
COL6A1-202ENST00000463060 C18orf8Q96DM3 657 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 ARHGEF26Q96DR7 871 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 SPATA17Q96L03 361 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 NOX5Q96PH1 765 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 C11orf70Q9BRQ4 267 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 EMILIN2Q9BXX0 1053 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 ZNF576Q9H609 170 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 SALL4Q9UJQ4 1053 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 USP3Q9Y6I4 520 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 DUSP10Q9Y6W6 482 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 MYH10P35580 1976 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 PATJQ8NI35 1801 aa15.13■□□□□ 0.01
COL6A1-202ENST00000463060 TMEM265A0A087WTH1 108 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 FAM170AA1A519 330 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 FAM92AA1XBS5 289 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 RFXAPO00287 272 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 PAPSS1O43252 624 aaPredicted RBP15.12■□□□□ 0.01
COL6A1-202ENST00000463060 CLASP2O75122 1294 aaKnown RBP15.12■□□□□ 0.01
COL6A1-202ENST00000463060 IPO7O95373 1038 aaKnown RBP15.12■□□□□ 0.01
COL6A1-202ENST00000463060 CALB1P05937 261 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms