RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 PPP3CCP48454 512 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 TAF12Q16514 161 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 CYP4A22Q5TCH4 519 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 SFMBT2Q5VUG0 894 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 DENND5BQ6ZUT9 1274 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 DRC7Q8IY82 874 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 C12orf76Q8N812 135 aaPredicted RBP15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 ZMIZ2Q8NF64 920 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 EPS8L1Q8TE68 723 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 SUSD6Q92537 303 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 HSFY1Q96LI6 401 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 FBXO44Q9H4M3 255 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 ASAH2Q9NR71 780 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 UXTQ9UBK9 157 aaPredicted RBP15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 CEP83Q9Y592 693 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 BZW2Q9Y6E2 419 aaKnown RBP15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 LRRC53A6NM62 1247 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 SLC38A8A6NNN8 435 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 SOBPA7XYQ1 873 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 M0QYV0 167 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 SOAT2O75908 522 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 LSM8O95777 96 aaKnown RBP15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 PNMA6AP0CW24 399 aaPredicted RBP15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 CDC25BP30305 580 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 PLA2G4AP47712 749 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 CACNA2D1P54289 1103 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 MAP3K7CLP57077 242 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 SNX16P57768 344 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 CDR2Q01850 454 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 ARID5BQ14865 1188 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 PTPN21Q16825 1174 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 PABPC1LQ4VXU2 614 aaKnown RBP15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 TRIM72Q6ZMU5 477 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 IRF2BP2Q7Z5L9 587 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 TTC30AQ86WT1 665 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 CNGA4Q8IV77 575 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 NUP93Q8N1F7 819 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 SLC35F5Q8WV83 523 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 KCTD13Q8WZ19 329 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 DDX1Q92499 740 aaKnown RBP15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 KCNK16Q96T55 309 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 TTLL2Q9BWV7 592 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 WDR6Q9NNW5 1121 aaKnown RBP15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 CYLDQ9NQC7 956 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 TMEM30AQ9NV96 361 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 IL37Q9NZH6 218 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 ZMYM5Q9UJ78 669 aa15.12■□□□□ 0.01
HMGXB4-204ENST00000455359 NCANO14594 1321 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 FAM92AA1XBS5 289 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 H3BQ06 376 aaPredicted RBP15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 TNFRSF10BO14763 440 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 HMGA1P17096 107 aaKnown RBP15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 HNRNPH3P31942 346 aaKnown RBP15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 CASP14P31944 242 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 PRKCIP41743 596 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 GPD2P43304 727 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 PDE4CQ08493 712 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 TBX2Q13207 712 aaPredicted RBP15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 CBX2Q14781 532 aaPredicted RBP15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 ASIC2Q16515 512 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 NOP9Q86U38 636 aaKnown RBP15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 PIGZQ86VD9 579 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 OR8K1Q8NGG5 319 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 OVCA2Q8WZ82 227 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 NOX5Q96PH1 765 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 LRRC3Q9BY71 257 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 PDCL3Q9H2J4 239 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 ACP6Q9NPH0 428 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 THEGQ9P2T0 379 aa15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 NOCTQ9UK39 431 aaKnown RBP15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 USP15Q9Y4E8 981 aaPredicted RBP15.11■□□□□ 0.01
HMGXB4-204ENST00000455359 HHLA1C9JL84 531 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 BEST1O76090 585 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 RHOP08100 348 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 YWHAQP27348 245 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 CDC25CP30307 473 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 CDH5P33151 784 aaPredicted RBP15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 ACADSBP45954 432 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 RPL34P49207 117 aaKnown RBP15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 GPR15P49685 360 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 KIF11P52732 1056 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 SLC5A3P53794 718 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 TSR1Q2NL82 804 aaKnown RBP15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 PPP1R2P3Q6NXS1 205 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 PDZD4Q76G19 769 aaPredicted RBP15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 GRASPQ7Z6J2 395 aaPredicted RBP15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 SCML4Q8N228 414 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 TMEM35BQ8NCS4 154 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 PDZD8Q8NEN9 1154 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 UBA3Q8TBC4 463 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 GIPC2Q8TF65 315 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 CPLX3Q8WVH0 158 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 ATXN2LQ8WWM7 1075 aaKnown RBP15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 SECISBP2LQ93073 1101 aaKnown RBP15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 GCNAQ96QF7 691 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 DNAJC7Q99615 494 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 CORO1BQ9BR76 489 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 GRPEL1Q9HAV7 217 aa15.1■□□□□ 0.01
HMGXB4-204ENST00000455359 LRRC4Q9HBW1 653 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms