RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 JAKMIP2Q96AA8 810 aa26.41■■□□□ 1.82
MSH2-203ENST00000454849 METTL14Q9HCE5 456 aaKnown RBP26.41■■□□□ 1.82
MSH2-203ENST00000454849 STARD6P59095 220 aa26.4■■□□□ 1.82
MSH2-203ENST00000454849 INCA1Q0VD86 236 aa26.4■■□□□ 1.82
MSH2-203ENST00000454849 UBXN2BQ14CS0 331 aa26.4■■□□□ 1.82
MSH2-203ENST00000454849 ARL14EPQ8N8R7 260 aaPredicted RBP26.4■■□□□ 1.82
MSH2-203ENST00000454849 RIN3Q8TB24 985 aa26.4■■□□□ 1.82
MSH2-203ENST00000454849 IRF7Q92985 503 aa26.4■■□□□ 1.82
MSH2-203ENST00000454849 E2F7Q96AV8 911 aa26.4■■□□□ 1.82
MSH2-203ENST00000454849 MED15Q96RN5 788 aa26.4■■□□□ 1.82
MSH2-203ENST00000454849 SMOQ99835 787 aa26.4■■□□□ 1.82
MSH2-203ENST00000454849 NT5C1AQ9BXI3 368 aa26.4■■□□□ 1.82
MSH2-203ENST00000454849 ATP8B3O60423 1300 aa26.39■■□□□ 1.82
MSH2-203ENST00000454849 CILPO75339 1184 aa26.39■■□□□ 1.82
MSH2-203ENST00000454849 FMO5P49326 533 aa26.39■■□□□ 1.82
MSH2-203ENST00000454849 MAP3K7CLP57077 242 aa26.39■■□□□ 1.82
MSH2-203ENST00000454849 TAF10Q12962 218 aa26.39■■□□□ 1.82
MSH2-203ENST00000454849 PHLDB3Q6NSJ2 640 aa26.39■■□□□ 1.82
MSH2-203ENST00000454849 BPIFB1Q8TDL5 484 aa26.39■■□□□ 1.82
MSH2-203ENST00000454849 SHDQ96IW2 340 aa26.39■■□□□ 1.82
MSH2-203ENST00000454849 NUP62CLQ9H1M0 184 aa26.39■■□□□ 1.82
MSH2-203ENST00000454849 CISHQ9NSE2 258 aa26.39■■□□□ 1.82
MSH2-203ENST00000454849 SIT1Q9Y3P8 196 aa26.39■■□□□ 1.82
MSH2-203ENST00000454849 FAM170BA6NMN3 283 aa26.38■■□□□ 1.81
MSH2-203ENST00000454849 SOX9P48436 509 aa26.38■■□□□ 1.81
MSH2-203ENST00000454849 TNK2Q07912 1038 aa26.38■■□□□ 1.81
MSH2-203ENST00000454849 TCF15Q12870 199 aa26.38■■□□□ 1.81
MSH2-203ENST00000454849 NUP93Q8N1F7 819 aa26.38■■□□□ 1.81
MSH2-203ENST00000454849 CELF5Q8N6W0 485 aaKnown RBP26.38■■□□□ 1.81
MSH2-203ENST00000454849 ZMIZ2Q8NF64 920 aa26.38■■□□□ 1.81
MSH2-203ENST00000454849 SMARCD1Q96GM5 515 aa26.38■■□□□ 1.81
MSH2-203ENST00000454849 HEXIM2Q96MH2 286 aaKnown RBP26.38■■□□□ 1.81
MSH2-203ENST00000454849 DMAP1Q9NPF5 467 aaPredicted RBP26.38■■□□□ 1.81
MSH2-203ENST00000454849 TDP1Q9NUW8 608 aa26.38■■□□□ 1.81
MSH2-203ENST00000454849 TRPM5Q9NZQ8 1165 aa26.38■■□□□ 1.81
MSH2-203ENST00000454849 CHORDC1Q9UHD1 332 aaPredicted RBP26.38■■□□□ 1.81
MSH2-203ENST00000454849 COQ4Q9Y3A0 265 aa26.38■■□□□ 1.81
MSH2-203ENST00000454849 KANSL1LA0AUZ9 987 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 SHISA7A6NL88 538 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 H0Y858 1186 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 CKMP06732 381 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 GLULP15104 373 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 DDX6P26196 483 aaKnown RBP eCLIP26.37■■□□□ 1.81
MSH2-203ENST00000454849 PRKCQQ04759 706 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 FCHO2Q0JRZ9 810 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 PJA1Q8NG27 643 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 DNASE1L2Q92874 299 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 CYFIP2Q96F07 1278 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 GBP4Q96PP9 640 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 TTLL2Q9BWV7 592 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 GKN1Q9NS71 199 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 GTSE1Q9NYZ3 720 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 RWDD2AQ9UIY3 292 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 NDRG2Q9UN36 371 aaKnown RBP26.37■■□□□ 1.81
MSH2-203ENST00000454849 PIAS3Q9Y6X2 628 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 GREB1Q4ZG55 1949 aa26.37■■□□□ 1.81
MSH2-203ENST00000454849 OBSL1O75147 1896 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 DENND4CQ5VZ89 1909 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 TRAV19A0A0A6YYK7 116 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 ARNTLO00327 626 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 CHADO15335 359 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 GALR2O43603 387 aaPredicted RBP26.36■■□□□ 1.81
MSH2-203ENST00000454849 HDCP19113 662 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 YWHAQP27348 245 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 WEE1P30291 646 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 TRIM68Q6AZZ1 485 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 GPT2Q8TD30 523 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 CSGALNACT1Q8TDX6 532 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 FBXO32Q969P5 355 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 FAM122AQ96E09 287 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 FAM86C1Q9NVL1 165 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 GCNT4Q9P109 453 aa26.36■■□□□ 1.81
MSH2-203ENST00000454849 ZNF840PA6NDX5 716 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 TNFRSF10BO14763 440 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 FAM200BP0CF97 657 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 KPNA1P52294 538 aaPredicted RBP26.35■■□□□ 1.81
MSH2-203ENST00000454849 SLC5A3P53794 718 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 RAD23BP54727 409 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 KCNH2Q12809 1159 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 CUL2Q13617 745 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 PPP1R26Q5T8A7 1209 aaPredicted RBP26.35■■□□□ 1.81
MSH2-203ENST00000454849 GPRIN1Q7Z2K8 1008 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 TRIM59Q8IWR1 403 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 DTWD2Q8NBA8 298 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 SLC4A11Q8NBS3 891 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 CEP295NLQ96MC4 621 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 HNRNPABQ99729 332 aaKnown RBP26.35■■□□□ 1.81
MSH2-203ENST00000454849 DDX23Q9BUQ8 820 aaKnown RBP26.35■■□□□ 1.81
MSH2-203ENST00000454849 LTB4R2Q9NPC1 389 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 OBP2AQ9NY56 170 aa26.35■■□□□ 1.81
MSH2-203ENST00000454849 ZNF638Q14966 1978 aaKnown RBP26.35■■□□□ 1.81
MSH2-203ENST00000454849 TICRRQ7Z2Z1 1910 aa26.34■■□□□ 1.81
MSH2-203ENST00000454849 USP17L7P0C7H9 530 aa26.34■■□□□ 1.81
MSH2-203ENST00000454849 TARSP26639 723 aaKnown RBP26.34■■□□□ 1.81
MSH2-203ENST00000454849 PGFP49763 221 aa26.34■■□□□ 1.81
MSH2-203ENST00000454849 DPCR1Q3MIW9 517 aa26.34■■□□□ 1.81
MSH2-203ENST00000454849 ARHGAP29Q52LW3 1261 aa26.34■■□□□ 1.81
MSH2-203ENST00000454849 FOXR2Q6PJQ5 311 aa26.34■■□□□ 1.81
MSH2-203ENST00000454849 ZNF852Q6ZMS4 543 aa26.34■■□□□ 1.81
MSH2-203ENST00000454849 CCDC105Q8IYK2 499 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms