RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 EYA2O00167 538 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 RBMXL2O75526 392 aaKnown RBP4.78□□□□□ -1.64
LINC01004-201ENST00000445184 IGLV2-14P01704 120 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 RXRGP48443 463 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 COPAP53621 1224 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 NPEPPSP55786 919 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 WNT3P56703 355 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 TBX2Q13207 712 aaPredicted RBP4.78□□□□□ -1.64
LINC01004-201ENST00000445184 RAB32Q13637 225 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 POSTNQ15063 836 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 JAKMIP3Q5VZ66 844 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 UNC13DQ70J99 1090 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 KRT73Q86Y46 540 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 CMTM4Q8IZR5 234 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 SDR16C5Q8N3Y7 309 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 GLIS1Q8NBF1 620 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 SLC35B2Q8TB61 432 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 STON2Q8WXE9 905 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 DDX17Q92841 729 aaKnown RBP4.78□□□□□ -1.64
LINC01004-201ENST00000445184 SCAMP4Q969E2 229 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 XPNPEP3Q9NQH7 507 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 RGL1Q9NZL6 768 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 NCDNQ9UBB6 729 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 PLEKHM1Q9Y4G2 1056 aa4.78□□□□□ -1.64
LINC01004-201ENST00000445184 IPO5O00410 1097 aaKnown RBP4.77□□□□□ -1.65
LINC01004-201ENST00000445184 HAUS5O94927 633 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 MAN1A1P33908 653 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 PTPN7P35236 360 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 CASRP41180 1078 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 CARSP49589 748 aaKnown RBP4.77□□□□□ -1.65
LINC01004-201ENST00000445184 ITGA8P53708 1063 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 PTTG1IPP53801 180 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 POU6F2P78424 691 aaPredicted RBP4.77□□□□□ -1.65
LINC01004-201ENST00000445184 APBA1Q02410 837 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 DCAF12L1Q5VU92 463 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 ARL6IP4Q66PJ3 421 aaKnown RBP4.77□□□□□ -1.65
LINC01004-201ENST00000445184 LMBRD2Q68DH5 695 aaPredicted RBP4.77□□□□□ -1.65
LINC01004-201ENST00000445184 USP17L6PQ6QN14 398 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 DOK3Q7L591 496 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 GAS2L3Q86XJ1 694 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 CLASRPQ8N2M8 674 aaKnown RBP4.77□□□□□ -1.65
LINC01004-201ENST00000445184 GALNT15Q8N3T1 639 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 FBXO18Q8NFZ0 1043 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 OTUD7AQ8TE49 926 aaPredicted RBP4.77□□□□□ -1.65
LINC01004-201ENST00000445184 SLC9A6Q92581 669 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 TNPO1Q92973 898 aaKnown RBP4.77□□□□□ -1.65
LINC01004-201ENST00000445184 USP13Q92995 863 aaPredicted RBP4.77□□□□□ -1.65
LINC01004-201ENST00000445184 CDC5LQ99459 802 aaKnown RBP4.77□□□□□ -1.65
LINC01004-201ENST00000445184 DDX23Q9BUQ8 820 aaKnown RBP4.77□□□□□ -1.65
LINC01004-201ENST00000445184 MRI1Q9BV20 369 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 KATNAL1Q9BW62 490 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 ITM2CQ9NQX7 267 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 DACT1Q9NYF0 836 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 SWAP70Q9UH65 585 aa4.77□□□□□ -1.65
LINC01004-201ENST00000445184 FBXO9Q9UK97 447 aaPredicted RBP4.77□□□□□ -1.65
LINC01004-201ENST00000445184 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.77□□□□□ -1.65
LINC01004-201ENST00000445184 OR2W5A6NFC9 320 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 B5MCH6 92 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 E9PLN8 166 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 RNASET2O00584 256 aaKnown RBP4.76□□□□□ -1.65
LINC01004-201ENST00000445184 DHHO43323 396 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 TBC1D4O60343 1298 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 UNC5CO95185 931 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 AGR2O95994 175 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 CHEK2O96017 543 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 SNRPA1P09661 255 aaKnown RBP4.76□□□□□ -1.65
LINC01004-201ENST00000445184 PIM1P11309 404 aaPredicted RBP4.76□□□□□ -1.65
LINC01004-201ENST00000445184 CKBP12277 381 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 ATP5JP18859 108 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 BTF3P20290 206 aaKnown RBP4.76□□□□□ -1.65
LINC01004-201ENST00000445184 IL1R2P27930 398 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 PLA2G5P39877 138 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 PNLIPRP1P54315 467 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 BLOC1S1P78537 153 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 FAM189BP81408 668 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 PRKG1Q13976 671 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 NPY5RQ15761 445 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 ATP2B3Q16720 1220 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 BMT2Q1RMZ1 405 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 TRIM71Q2Q1W2 868 aaKnown RBP4.76□□□□□ -1.65
LINC01004-201ENST00000445184 METTL24Q5JXM2 366 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 FBXO47Q5MNV8 452 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 HYIQ5T013 277 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 FCRL6Q6DN72 434 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 TXLNBQ8N3L3 684 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 NAXEQ8NCW5 288 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 NLGN4YQ8NFZ3 816 aaPredicted RBP4.76□□□□□ -1.65
LINC01004-201ENST00000445184 HERVK_113Q902F9 699 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 ZNF778Q96MU6 729 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 VKORC1Q9BQB6 163 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 MESP1Q9BRJ9 268 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 TINAGL1Q9GZM7 467 aaPredicted RBP4.76□□□□□ -1.65
LINC01004-201ENST00000445184 BRD9Q9H8M2 597 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 RRN3Q9NYV6 651 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 TRPM5Q9NZQ8 1165 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 SLC45A2Q9UMX9 530 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 AGAP1Q9UPQ3 857 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 RUVBL1Q9Y265 456 aaKnown RBP4.76□□□□□ -1.65
LINC01004-201ENST00000445184 TMEM98Q9Y2Y6 226 aa4.76□□□□□ -1.65
LINC01004-201ENST00000445184 SCINQ9Y6U3 715 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms