RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SLC6A3Q01959 620 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 DHX9Q08211 1270 aaKnown RBP13.83□□□□□ -0.2
CPSF4-206ENST00000441580 GRIK3Q13003 919 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 TAZQ16635 292 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 BBS12Q6ZW61 710 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 SLC26A9Q7LBE3 791 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 HOOK3Q86VS8 718 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 EMC1Q8N766 993 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 C12orf29Q8N999 325 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 B3GALNT2Q8NCR0 500 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 SLAIN1Q8ND83 568 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 CD99L2Q8TCZ2 262 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 SLC35F5Q8WV83 523 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 UBLCP1Q8WVY7 318 aaPredicted RBP13.83□□□□□ -0.2
CPSF4-206ENST00000441580 TEKT4Q8WW24 435 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 NKD2Q969F2 451 aaPredicted RBP13.83□□□□□ -0.2
CPSF4-206ENST00000441580 HSFY1Q96LI6 401 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 HERPUD2Q9BSE4 406 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 HEMGNQ9BXL5 484 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 FOXP3Q9BZS1 431 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 DPEP3Q9H4B8 488 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 FAM204AQ9H8W3 233 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 GOLGA2P5Q9HBQ8 144 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 RNF186Q9NXI6 227 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 R3HDM2Q9Y2K5 976 aaKnown RBP13.83□□□□□ -0.2
CPSF4-206ENST00000441580 NME7Q9Y5B8 376 aa13.83□□□□□ -0.2
CPSF4-206ENST00000441580 HMGB1P1B2RPK0 211 aaPredicted RBP13.82□□□□□ -0.2
CPSF4-206ENST00000441580 PI4K2BG5E9Z4 385 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 CYB561D2O14569 222 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 PRPSAP2O60256 369 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 NUDT17P0C025 328 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 FGFR1P11362 822 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 CCDC130P13994 396 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 MIPP30301 263 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 PTPN9P43378 593 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 LHX1P48742 406 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 ACLYP53396 1101 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 PMS2P54278 862 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 PLTPP55058 493 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 VCPP55072 806 aaKnown RBP13.82□□□□□ -0.2
CPSF4-206ENST00000441580 PDE4CQ08493 712 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 SNX1Q13596 522 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 ITGA7Q13683 1181 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 BYSLQ13895 437 aaKnown RBP13.82□□□□□ -0.2
CPSF4-206ENST00000441580 DSC3Q14574 896 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 UAP1Q16222 522 aaPredicted RBP13.82□□□□□ -0.2
CPSF4-206ENST00000441580 TRIM71Q2Q1W2 868 aaKnown RBP13.82□□□□□ -0.2
CPSF4-206ENST00000441580 DENND2CQ68D51 928 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 FAM43BQ6ZT52 329 aaPredicted RBP13.82□□□□□ -0.2
CPSF4-206ENST00000441580 FBXO25Q8TCJ0 367 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 PIK3R5Q8WYR1 880 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 ZFP42Q96MM3 310 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 GLT1D1Q96MS3 346 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 UROC1Q96N76 676 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 HNRNPABQ99729 332 aaKnown RBP13.82□□□□□ -0.2
CPSF4-206ENST00000441580 SEZ6LQ9BYH1 1024 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 TSPYL2Q9H2G4 693 aaPredicted RBP13.82□□□□□ -0.2
CPSF4-206ENST00000441580 ZWILCHQ9H900 591 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 RSAD1Q9HA92 442 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 USP18Q9UMW8 372 aa13.82□□□□□ -0.2
CPSF4-206ENST00000441580 C3orf70A6NLC5 250 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-206ENST00000441580 ZNF487B1APH4 448 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 GABRDO14764 452 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 TRUB2O95900 331 aaKnown RBP13.81□□□□□ -0.2
CPSF4-206ENST00000441580 MYCNP04198 464 aaPredicted RBP13.81□□□□□ -0.2
CPSF4-206ENST00000441580 ITGAVP06756 1048 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 MYZAPP0CAP1 466 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 GHRP10912 638 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 ODC1P11926 461 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 PDGFRAP16234 1089 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 ADORA2BP29275 332 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 CD52P31358 61 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 KCNJ1P48048 391 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 RGS7P49802 495 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 LPIN1Q14693 890 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 PDK2Q15119 407 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 CEP85LQ5SZL2 805 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 KAZNQ674X7 775 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 PMF1Q6P1K2 205 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 MAP7D3Q8IWC1 876 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 RXFP2Q8WXD0 754 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 RAPGEF5Q92565 580 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 GAD1Q99259 594 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 PABPC3Q9H361 631 aaKnown RBP13.81□□□□□ -0.2
CPSF4-206ENST00000441580 PADI3Q9ULW8 664 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 DRG1Q9Y295 367 aaKnown RBP13.81□□□□□ -0.2
CPSF4-206ENST00000441580 NEU2Q9Y3R4 380 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 GRIN2DO15399 1336 aa13.81□□□□□ -0.2
CPSF4-206ENST00000441580 ARL5CA6NH57 179 aa13.8□□□□□ -0.2
CPSF4-206ENST00000441580 A6NNZ2 444 aa13.8□□□□□ -0.2
CPSF4-206ENST00000441580 MDM4O15151 490 aa13.8□□□□□ -0.2
CPSF4-206ENST00000441580 INPPL1O15357 1258 aa13.8□□□□□ -0.2
CPSF4-206ENST00000441580 PAPSS1O43252 624 aaPredicted RBP13.8□□□□□ -0.2
CPSF4-206ENST00000441580 DAB1O75553 588 aa13.8□□□□□ -0.2
CPSF4-206ENST00000441580 NPR3P17342 541 aa13.8□□□□□ -0.2
CPSF4-206ENST00000441580 KDELR1P24390 212 aa13.8□□□□□ -0.2
CPSF4-206ENST00000441580 IL1R2P27930 398 aa13.8□□□□□ -0.2
CPSF4-206ENST00000441580 PCSK1P29120 753 aa13.8□□□□□ -0.2
CPSF4-206ENST00000441580 MAP2K2P36507 400 aa13.8□□□□□ -0.2
CPSF4-206ENST00000441580 FLT3P36888 993 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms