RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 PTPN5P54829 565 aa25.51■■□□□ 1.67
CPNE1-217ENST00000439669 FCHO2Q0JRZ9 810 aa25.51■■□□□ 1.67
CPNE1-217ENST00000439669 UBXN2BQ14CS0 331 aa25.51■■□□□ 1.67
CPNE1-217ENST00000439669 FOXR2Q6PJQ5 311 aa25.51■■□□□ 1.67
CPNE1-217ENST00000439669 FUKQ8N0W3 1084 aa25.51■■□□□ 1.67
CPNE1-217ENST00000439669 PJA1Q8NG27 643 aa25.51■■□□□ 1.67
CPNE1-217ENST00000439669 SLC2A14Q8TDB8 520 aa25.51■■□□□ 1.67
CPNE1-217ENST00000439669 CSGALNACT1Q8TDX6 532 aa25.51■■□□□ 1.67
CPNE1-217ENST00000439669 LRRC3BQ96PB8 259 aa25.51■■□□□ 1.67
CPNE1-217ENST00000439669 TWNKQ96RR1 684 aa25.51■■□□□ 1.67
CPNE1-217ENST00000439669 TTLL2Q9BWV7 592 aa25.51■■□□□ 1.67
CPNE1-217ENST00000439669 DNAI2Q9GZS0 605 aa25.51■■□□□ 1.67
CPNE1-217ENST00000439669 CLSTN2Q9H4D0 955 aa25.51■■□□□ 1.67
CPNE1-217ENST00000439669 TRAV19A0A0A6YYK7 116 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 SOBPA7XYQ1 873 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 CILPO75339 1184 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 DCNP07585 359 aaKnown RBP25.5■■□□□ 1.67
CPNE1-217ENST00000439669 CD72P21854 359 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 ADORA2BP29275 332 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 GREB1Q4ZG55 1949 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 ARHGAP29Q52LW3 1261 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 MUC6Q6W4X9 2439 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 CLEC17AQ6ZS10 378 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 PAQR9Q6ZVX9 377 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 C12orf29Q8N999 325 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 USP13Q92995 863 aaPredicted RBP25.5■■□□□ 1.67
CPNE1-217ENST00000439669 ZFYVE19Q96K21 471 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 KCNK16Q96T55 309 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 DDX23Q9BUQ8 820 aaKnown RBP25.5■■□□□ 1.67
CPNE1-217ENST00000439669 KIF9Q9HAQ2 790 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 TRPV5Q9NQA5 729 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 TDP1Q9NUW8 608 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 TRPM5Q9NZQ8 1165 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 CCL26Q9Y258 94 aa25.5■■□□□ 1.67
CPNE1-217ENST00000439669 CKMP06732 381 aa25.49■■□□□ 1.67
CPNE1-217ENST00000439669 TCF15Q12870 199 aa25.49■■□□□ 1.67
CPNE1-217ENST00000439669 ZNF852Q6ZMS4 543 aa25.49■■□□□ 1.67
CPNE1-217ENST00000439669 CCDC105Q8IYK2 499 aa25.49■■□□□ 1.67
CPNE1-217ENST00000439669 NUP93Q8N1F7 819 aa25.49■■□□□ 1.67
CPNE1-217ENST00000439669 FAXDC2Q96IV6 333 aa25.49■■□□□ 1.67
CPNE1-217ENST00000439669 GBP4Q96PP9 640 aa25.49■■□□□ 1.67
CPNE1-217ENST00000439669 LTB4R2Q9NPC1 389 aa25.49■■□□□ 1.67
CPNE1-217ENST00000439669 THG1LQ9NWX6 298 aaKnown RBP25.49■■□□□ 1.67
CPNE1-217ENST00000439669 COQ4Q9Y3A0 265 aa25.49■■□□□ 1.67
CPNE1-217ENST00000439669 PIAS3Q9Y6X2 628 aa25.49■■□□□ 1.67
CPNE1-217ENST00000439669 TICRRQ7Z2Z1 1910 aa25.49■■□□□ 1.67
CPNE1-217ENST00000439669 C2orf78A6NCI8 922 aa25.48■■□□□ 1.67
CPNE1-217ENST00000439669 FMO5P49326 533 aa25.48■■□□□ 1.67
CPNE1-217ENST00000439669 TAF10Q12962 218 aa25.48■■□□□ 1.67
CPNE1-217ENST00000439669 ZNF394Q53GI3 561 aa25.48■■□□□ 1.67
CPNE1-217ENST00000439669 DTWD2Q8NBA8 298 aa25.48■■□□□ 1.67
CPNE1-217ENST00000439669 TTC16Q8NEE8 873 aa25.48■■□□□ 1.67
CPNE1-217ENST00000439669 TATDN2Q93075 761 aa25.48■■□□□ 1.67
CPNE1-217ENST00000439669 SLITRK1Q96PX8 696 aa25.48■■□□□ 1.67
CPNE1-217ENST00000439669 ARID3AQ99856 593 aa25.48■■□□□ 1.67
CPNE1-217ENST00000439669 SRRTQ9BXP5 876 aaKnown RBP25.48■■□□□ 1.67
CPNE1-217ENST00000439669 MRPS17Q9Y2R5 130 aaKnown RBP25.48■■□□□ 1.67
CPNE1-217ENST00000439669 ZNF638Q14966 1978 aaKnown RBP25.47■■□□□ 1.67
CPNE1-217ENST00000439669 FAM170BA6NMN3 283 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 ARNTLO00327 626 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 RTN3O95197 1032 aaPredicted RBP25.47■■□□□ 1.67
CPNE1-217ENST00000439669 GNA14O95837 355 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 ABL1P00519 1130 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 USP17L7P0C7H9 530 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 FAM200BP0CF97 657 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 YWHAQP27348 245 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 PLCB2Q00722 1185 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 NHLH1Q02575 133 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 TTC39CQ8N584 583 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 ARL14EPQ8N8R7 260 aaPredicted RBP25.47■■□□□ 1.67
CPNE1-217ENST00000439669 WHAMMQ8TF30 809 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 IPO9Q96P70 1041 aaKnown RBP25.47■■□□□ 1.67
CPNE1-217ENST00000439669 SLC22A12Q96S37 553 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 CYP2S1Q96SQ9 504 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 NUP62CLQ9H1M0 184 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 CISHQ9NSE2 258 aa25.47■■□□□ 1.67
CPNE1-217ENST00000439669 COL4A2P08572 1712 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 MAN2B1O00754 1011 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 FGFR1OPO95684 399 aaKnown RBP25.46■■□□□ 1.67
CPNE1-217ENST00000439669 PPP3CCP48454 512 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 PDE6CP51160 858 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 KPNA1P52294 538 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-217ENST00000439669 SLC5A3P53794 718 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 MAP3K7CLP57077 242 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 LRMPQ12912 555 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 ZNF268Q14587 947 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-217ENST00000439669 TTC8Q8TAM2 541 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 FBXO32Q969P5 355 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 CYFIP2Q96F07 1278 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 HNRNPABQ99729 332 aaKnown RBP25.46■■□□□ 1.67
CPNE1-217ENST00000439669 SMOQ99835 787 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 LMBRD1Q9NUN5 540 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 GCNT4Q9P109 453 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 RWDD2AQ9UIY3 292 aa25.46■■□□□ 1.67
CPNE1-217ENST00000439669 MTF2Q9Y483 593 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-217ENST00000439669 ZNF840PA6NDX5 716 aa25.45■■□□□ 1.66
CPNE1-217ENST00000439669 H0Y858 1186 aa25.45■■□□□ 1.66
CPNE1-217ENST00000439669 HDCP19113 662 aa25.45■■□□□ 1.66
CPNE1-217ENST00000439669 TARSP26639 723 aaKnown RBP25.45■■□□□ 1.66
CPNE1-217ENST00000439669 CC2D1AQ6P1N0 951 aaPredicted RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms