RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 REREQ9P2R6 1566 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 DIAPH2O60879 1101 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 GLUD1P00367 558 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 RFX3P48380 749 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 EPM2AIP1Q7L775 607 aaPredicted RBP12.58□□□□□ -0.4
NEK1-201ENST00000439128 TFAP2DQ7Z6R9 452 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 OTULINQ96BN8 352 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 SERPINI1Q99574 410 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 CAPN11Q9UMQ6 739 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 PCDHB9Q9Y5E1 797 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 USH1CQ9Y6N9 552 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 FAM86B1E9PN63 330 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 IFRD1O00458 451 aaPredicted RBP12.58□□□□□ -0.4
NEK1-201ENST00000439128 SCAMP3O14828 347 aaKnown RBP12.58□□□□□ -0.4
NEK1-201ENST00000439128 FAM86B2P0C5J1 330 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 CCR1P32246 355 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 HIRAP54198 1017 aaPredicted RBP12.58□□□□□ -0.4
NEK1-201ENST00000439128 FAM131BQ86XD5 332 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 FAM172AQ8WUF8 416 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 TRIM55Q9BYV6 548 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 ZCWPW1Q9H0M4 648 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 BRD9Q9H8M2 597 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 CYP3A43Q9HB55 503 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 LIMA1Q9UHB6 759 aaKnown RBP12.58□□□□□ -0.4
NEK1-201ENST00000439128 ADGRA2Q96PE1 1338 aa12.58□□□□□ -0.4
NEK1-201ENST00000439128 E2F8A0AVK6 867 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 CCDC38Q502W7 563 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 BOLA3Q53S33 107 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 NIPA1Q7RTP0 329 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 ZNF438Q7Z4V0 828 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 ASPSCR1Q9BZE9 553 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 ATP13A1Q9HD20 1204 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 GPATCH2LQ9NWQ4 482 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 PKD2L2Q9NZM6 624 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 MEFVO15553 781 aaPredicted RBP12.57□□□□□ -0.4
NEK1-201ENST00000439128 LRRC74AQ0VAA2 488 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 PRKAA1Q13131 559 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 NCAPHQ15003 741 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 ANKS6Q68DC2 871 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 C15orf52Q6ZUT6 534 aaKnown RBP12.57□□□□□ -0.4
NEK1-201ENST00000439128 PPP1R36Q96LQ0 422 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 C1QTNF7Q9BXJ2 289 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 DCLK3Q9C098 648 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 C11orf49Q9H6J7 331 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 SRP72O76094 671 aaKnown RBP12.57□□□□□ -0.4
NEK1-201ENST00000439128 PMS2P54278 862 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 ADIGQ0VDE8 80 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 PTK6Q13882 451 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 ABHD8Q96I13 439 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 OSBPL9Q96SU4 736 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 PDGFCQ9NRA1 345 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 CISHQ9NSE2 258 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 PPARGC1AQ9UBK2 798 aaKnown RBP12.57□□□□□ -0.4
NEK1-201ENST00000439128 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.57□□□□□ -0.4
NEK1-201ENST00000439128 ZC3H7BQ9UGR2 993 aaKnown RBP12.57□□□□□ -0.4
NEK1-201ENST00000439128 MRPL42Q9Y6G3 142 aaKnown RBP12.57□□□□□ -0.4
NEK1-201ENST00000439128 GAKO14976 1311 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 FDPSP14324 419 aaKnown RBP12.57□□□□□ -0.4
NEK1-201ENST00000439128 NDST1P52848 882 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 C21orf59P57076 290 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 FSCBQ5H9T9 825 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 UGT3A1Q6NUS8 523 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 NT5MQ9NPB1 228 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 LNPEPQ9UIQ6 1025 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 SEPT4O43236 478 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 SPAG7O75391 227 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 SEC31AO94979 1220 aaKnown RBP12.57□□□□□ -0.4
NEK1-201ENST00000439128 ITGALP20701 1170 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 OR1E1P30953 314 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 SOAT1P35610 550 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 NNTQ13423 1086 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 PSMD5Q16401 504 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 LINC00523Q86TU6 105 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 NUDCD3Q8IVD9 361 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 SENP8Q96LD8 212 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 MRPL46Q9H2W6 279 aaKnown RBP12.57□□□□□ -0.4
NEK1-201ENST00000439128 FGFR1OP2Q9NVK5 253 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 WWOXQ9NZC7 414 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 TRMT6Q9UJA5 497 aaKnown RBP12.57□□□□□ -0.4
NEK1-201ENST00000439128 SUFUQ9UMX1 484 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 TRIM33Q9UPN9 1127 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 PLAAQ9Y263 795 aa12.57□□□□□ -0.4
NEK1-201ENST00000439128 ZSCAN9O15535 394 aaPredicted RBP12.56□□□□□ -0.4
NEK1-201ENST00000439128 MAP3K6O95382 1288 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 ASGR1P07306 291 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 GRK3P35626 688 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 HPCAP84074 193 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 PTPN11Q06124 597 aaPredicted RBP12.56□□□□□ -0.4
NEK1-201ENST00000439128 EFTUD2Q15029 972 aaKnown RBP eCLIP12.56□□□□□ -0.4
NEK1-201ENST00000439128 BCAS4Q8TDM0 211 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 PAK5Q9P286 719 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 FRMD3A2A2Y4 597 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 OPHN1O60890 802 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 ARID5BQ14865 1188 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 SEC23AQ15436 765 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 TCEA2Q15560 299 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 C2CD6Q53TS8 623 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 FBXL19Q6PCT2 694 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 IL17RAQ96F46 866 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 CCDC138Q96M89 665 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms