RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 LDHCP07864 332 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 HIBADHP31937 336 aaKnown RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 CDH15P55291 814 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 HDAC4P56524 1084 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 MRPS22P82650 360 aaKnown RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 GRIK5Q16478 980 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 ANKRD22Q5VYY1 191 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 LRGUKQ96M69 825 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 SETDB2Q96T68 719 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 COPS7BQ9H9Q2 264 aaPredicted RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 POMPQ9Y244 141 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 CAPN14A8MX76 684 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 MGEA5O60502 916 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 ADAM23O75077 832 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 TOP3BO95985 862 aaKnown RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 INHBAP08476 426 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 SPATA31C1P0DKV0 1188 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 RPL10P27635 214 aaKnown RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 HSPA1LP34931 641 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 MAPK10P53779 464 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 BMPR2Q13873 1038 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 CCNG2Q16589 344 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 NRF1Q16656 503 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 POLNQ7Z5Q5 900 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 OGFOD1Q8N543 542 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 DEPTORQ8TB45 409 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 ZDHHC7Q9NXF8 308 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 SLC24A2Q9UI40 661 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 TMA7Q9Y2S6 64 aaKnown RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 PIK3R2O00459 728 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 CFLARO15519 480 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 SERPINB7O75635 380 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 OCM2P0CE71 109 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 OCMP0CE72 109 aaPredicted RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 RINT1Q6NUQ1 792 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 POTEHQ6S545 545 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 TDRPQ86YL5 185 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 NUDCD3Q8IVD9 361 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 PPM1NQ8N819 430 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 TTC13Q8NBP0 860 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 E2F7Q96AV8 911 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 C11orf70Q9BRQ4 267 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 RBM38Q9H0Z9 239 aaKnown RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 Q9H521 79 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 COQ6Q9Y2Z9 468 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 ATICP31939 592 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 SP4Q02446 784 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 FNBP1LQ5T0N5 605 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 SLC2A7Q6PXP3 512 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 XKR5Q6UX68 686 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 SAPCD2Q86UD0 394 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 CRLF3Q8IUI8 442 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 CELF1Q92879 486 aaKnown RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 KREMEN1Q96MU8 473 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 RSL24D1Q9UHA3 163 aaKnown RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 GNEQ9Y223 722 aaKnown RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 TMEM98Q9Y2Y6 226 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 E9PBE3 544 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 NOP56O00567 594 aaKnown RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 LYPLA1O75608 230 aaPredicted RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 TNFAIP8O95379 198 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 THRAP10827 490 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 CYP11B1P15538 503 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 STIP1P31948 543 aaKnown RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 EFHC2Q5JST6 749 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 C14orf80Q86SX3 495 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 ADGRF4Q8IZF3 695 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 BBS5Q8N3I7 341 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 DACT3Q96B18 629 aaPredicted RBP7.77□□□□□ -1.17
CPSF6-202ENST00000435070 MAML3Q96JK9 1138 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 SLC4A9Q96Q91 983 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 HEPHQ9BQS7 1158 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 PRDM16Q9HAZ2 1276 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 UVRAGQ9P2Y5 699 aa7.77□□□□□ -1.17
CPSF6-202ENST00000435070 RGPD5Q99666 1765 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 TRIM49D1C9J1S8 452 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 F5H6K3 240 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 ALOX15BO15296 676 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 TM9SF1O15321 606 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 FAM58BPP0C7Q3 252 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 SLURP2P0DP57 97 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 TCF4P15884 667 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 KLRC2P26717 231 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 PHBP35232 272 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 DMPKQ09013 629 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 CASP10Q92851 521 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 TRIM63Q969Q1 353 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 PPP1R10Q96QC0 940 aaKnown RBP7.76□□□□□ -1.17
CPSF6-202ENST00000435070 PI4K2AQ9BTU6 479 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 C20orf27Q9GZN8 174 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 NACA2Q9H009 215 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 HERC5Q9UII4 1024 aaKnown RBP7.76□□□□□ -1.17
CPSF6-202ENST00000435070 MINPP1Q9UNW1 487 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 IVNS1ABPQ9Y6Y0 642 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 KIF13AQ9H1H9 1805 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 SH3PXD2BA1X283 911 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 J3QRK9 145 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 CYP1A2P05177 515 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 SLC1A1P43005 524 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 SLC18A1P54219 525 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms