RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 RRN3Q9NYV6 651 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 QRICH2Q9H0J4 1663 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 A0A0A6YYK5 440 aaPredicted RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 SDR42E2A6NKP2 422 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 THRAP10827 490 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 PSMA4P25789 261 aaKnown RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 CYP4A22Q5TCH4 519 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 SRLQ86TD4 932 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 C1orf131Q8NDD1 294 aaKnown RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 DNAJC9Q8WXX5 260 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 RSPH1Q8WYR4 309 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 SH3GL1Q99961 368 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 ASCC2Q9H1I8 757 aaPredicted RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 EHD4Q9H223 541 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 PABPC3Q9H361 631 aaKnown RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 SPASTQ9UBP0 616 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 MARCOQ9UEW3 520 aaPredicted RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 PPP1R3GB7ZBB8 358 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 TRIM49D1C9J1S8 452 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 IFNA14P01570 189 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 PTPN7P35236 360 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 SOAT1P35610 550 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 CTCFP49711 727 aaPredicted RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 CLK1P49759 484 aaKnown RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 BTNL9Q6UXG8 535 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 PRPF39Q86UA1 669 aaKnown RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 PCSK9Q8NBP7 692 aaKnown RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 RPRD1AQ96P16 312 aaPredicted RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 SLC25A13Q9UJS0 675 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 IPPQ9Y573 584 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 DYRK3O43781 588 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 UPP2O95045 317 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 RBP1P09455 135 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 SREBF1P36956 1147 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 HUNKP57058 714 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 VPS50Q96JG6 964 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 E7ENQ6 273 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 RNASEH1O60930 286 aaKnown RBP13.25□□□□□ -0.29
LDB3-205ENST00000429277 AP1G2O75843 785 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 CRTAMO95727 393 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 SUPT20HL2P0C7V6 817 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 ACADSP16219 412 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 ITGALP20701 1170 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 PRIM2P49643 509 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 TFDP3Q5H9I0 405 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 TAAR1Q96RJ0 339 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 PRRG3Q9BZD7 231 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 NDUFA13Q9P0J0 144 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 ADGRA2Q96PE1 1338 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 MAPTP10636 758 aaKnown RBP13.25□□□□□ -0.29
LDB3-205ENST00000429277 MAP3K7CLP57077 242 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 NFE2Q16621 373 aaPredicted RBP13.25□□□□□ -0.29
LDB3-205ENST00000429277 PPP1R36Q96LQ0 422 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 AGBL1Q96MI9 1066 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 ZIM3Q96PE6 472 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 DNAJC7Q99615 494 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 EPC1Q9H2F5 836 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 ASS1P00966 412 aaKnown RBP13.25□□□□□ -0.29
LDB3-205ENST00000429277 MZF1P28698 734 aaPredicted RBP13.25□□□□□ -0.29
LDB3-205ENST00000429277 CAP2P40123 477 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 CLEC16AQ2KHT3 1053 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 RFX8Q6ZV50 586 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 SLC20A1Q8WUM9 679 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 GMCL1Q96IK5 515 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 CNDP1Q96KN2 507 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 PHF20L1A8MW92 1017 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 CCDC159P0C7I6 412 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 AMPD2Q01433 879 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 TGM3Q08188 693 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 ERO1BQ86YB8 467 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 WDR49Q8IV35 697 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 MYO1HQ8N1T3 1032 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 CAMKK2Q96RR4 588 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 SH2D3AQ9BRG2 576 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 ABI2Q9NYB9 513 aaPredicted RBP13.25□□□□□ -0.29
LDB3-205ENST00000429277 RPS6KL1Q9Y6S9 549 aa13.25□□□□□ -0.29
LDB3-205ENST00000429277 SERPINI2O75830 405 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 KCNA3P22001 575 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 TROAPQ12815 778 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 PLEKHH3Q7Z736 793 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 SH2D3CQ8N5H7 860 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 LINC00116Q8NCU8 138 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 GMCL1P1Q8NEA9 526 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 ZNF333Q96JL9 665 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 IRX2Q9BZI1 471 aaPredicted RBP13.24□□□□□ -0.29
LDB3-205ENST00000429277 SYNDIG1Q9H7V2 258 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 WDR41Q9HAD4 459 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 EFCAB1Q9HAE3 211 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 CAB39Q9Y376 341 aaPredicted RBP13.24□□□□□ -0.29
LDB3-205ENST00000429277 GRK2P25098 689 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 OXCT1P55809 520 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 TMEM62Q0P6H9 643 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 KRR1Q13601 381 aaKnown RBP13.24□□□□□ -0.29
LDB3-205ENST00000429277 ZNF284Q2VY69 593 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 ARRDC4Q8NCT1 418 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 DDI1Q8WTU0 396 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 BTN2A2Q8WVV5 523 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 CNBD2Q96M20 576 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 IMPAD1Q9NX62 359 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 CARNS1A5YM72 827 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms