RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 HPS4Q9NQG7 708 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 RBM12Q9NTZ6 932 aaKnown RBP13.56□□□□□ -0.24
GPC1-204ENST00000426280 RMND1Q9NWS8 449 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 PIAS3Q9Y6X2 628 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 PTPRDP23468 1912 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 GREB1Q4ZG55 1949 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 DENND4CQ5VZ89 1909 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 ANTXRLA6NF34 631 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 TNFRSF10BO14763 440 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 CETN3O15182 167 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 CLSTN1O94985 981 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 KRT13P13646 458 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 ARSAP15289 507 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 RFX1P22670 979 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 NUBP1P53384 320 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 STX17P56962 302 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 IFRD2Q12894 506 aaPredicted RBP13.55□□□□□ -0.24
GPC1-204ENST00000426280 TAF10Q12962 218 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 GAS6Q14393 721 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 TTI2Q6NXR4 508 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 FRMD5Q7Z6J6 570 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 CELF5Q8N6W0 485 aaKnown RBP13.55□□□□□ -0.24
GPC1-204ENST00000426280 FAM3CQ92520 227 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 MRPS31Q92665 395 aaKnown RBP13.55□□□□□ -0.24
GPC1-204ENST00000426280 TAF4BQ92750 862 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 E2F7Q96AV8 911 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 CLDN23Q96B33 292 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 PRRX2Q99811 253 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 NUP62CLQ9H1M0 184 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 LINC00597Q9H2U6 94 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 FBRSL1Q9HCM7 1045 aaKnown RBP13.55□□□□□ -0.24
GPC1-204ENST00000426280 FAM49BQ9NUQ9 324 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 C2orf42Q9NWW7 574 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 OBP2AQ9NY56 170 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 KIAA1468Q9P260 1216 aa13.55□□□□□ -0.24
GPC1-204ENST00000426280 CHORDC1Q9UHD1 332 aaPredicted RBP13.55□□□□□ -0.24
GPC1-204ENST00000426280 ZNF840PA6NDX5 716 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 DPYSL4O14531 572 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 SCAMP3O14828 347 aaKnown RBP13.54□□□□□ -0.24
GPC1-204ENST00000426280 CHRNB1P11230 501 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 CD58P19256 250 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 NOP14P78316 857 aaKnown RBP13.54□□□□□ -0.24
GPC1-204ENST00000426280 FKBP3Q00688 224 aaKnown RBP13.54□□□□□ -0.24
GPC1-204ENST00000426280 MAPRE1Q15691 268 aaKnown RBP13.54□□□□□ -0.24
GPC1-204ENST00000426280 KRT39Q6A163 491 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 KLHL10Q6JEL2 608 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 TSSK4Q6SA08 328 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 ZNF852Q6ZMS4 543 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 ASCL5Q7RTU5 278 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 GPRIN1Q7Z2K8 1008 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 C1orf210Q8IVY1 113 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 YAF2Q8IY57 180 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 TTC16Q8NEE8 873 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 SLC2A14Q8TDB8 520 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 WBP2Q969T9 261 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 SLC35C1Q96A29 364 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 GCNAQ96QF7 691 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 MED10Q9BTT4 135 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 EBF3Q9H4W6 596 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 LMAN1LQ9HAT1 526 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 TDP1Q9NUW8 608 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 RAB20Q9NX57 234 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 IL37Q9NZH6 218 aa13.54□□□□□ -0.24
GPC1-204ENST00000426280 NUP210Q8TEM1 1887 aaPredicted RBP13.54□□□□□ -0.24
GPC1-204ENST00000426280 ANAPC1Q9H1A4 1944 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 HHLA1C9JL84 531 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 SPECC1L-ADORA2AF8WAN1 911 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 CILPO75339 1184 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 SP9P0CG40 484 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 EPB41P11171 864 aaKnown RBP13.53□□□□□ -0.24
GPC1-204ENST00000426280 HDCP19113 662 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 DDX6P26196 483 aaKnown RBP eCLIP13.53□□□□□ -0.24
GPC1-204ENST00000426280 ADORA2BP29275 332 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 AVPR1AP37288 418 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 ENPEPQ07075 957 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 INCA1Q0VD86 236 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 MTAPQ13126 283 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 ZNF77Q15935 545 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 ARHGAP29Q52LW3 1261 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 ZNF394Q53GI3 561 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 NUP93Q8N1F7 819 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 NELFBQ8WX92 580 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 DHTKD1Q96HY7 919 aaPredicted RBP13.53□□□□□ -0.24
GPC1-204ENST00000426280 OSBPL6Q9BZF3 934 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 KRT82Q9NSB4 513 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 UXTQ9UBK9 157 aaPredicted RBP13.53□□□□□ -0.24
GPC1-204ENST00000426280 CTNND2Q9UQB3 1225 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 WNT6Q9Y6F9 365 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 R4GN57 208 aa13.53□□□□□ -0.24
GPC1-204ENST00000426280 KIF26AQ9ULI4 1882 aaPredicted RBP13.53□□□□□ -0.24
GPC1-204ENST00000426280 TRIM66O15016 1216 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 AP1G2O75843 785 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 MBD3O95983 291 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 ABL1P00519 1130 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 CALCAP01258 141 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 ANXA13P27216 316 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 GTF2H1P32780 548 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 CTHP32929 405 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 NBL1P41271 181 aa13.52□□□□□ -0.25
GPC1-204ENST00000426280 MXI1P50539 228 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms