RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 CES2O00748 559 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 DCLK1O15075 740 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 LINC01565O15544 149 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 HTRA2O43464 458 aaPredicted RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 SGTAO43765 313 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 VNN1O95497 513 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 SYF2O95926 243 aaKnown RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 TOMM40O96008 361 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 MT-CO3P00414 261 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 PRKCBP05771 671 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 NGFRP08138 427 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 CTSAP10619 480 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 MYCLP12524 364 aaPredicted RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 PLA2G2AP14555 144 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 C5AR1P21730 350 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 EDNRBP24530 442 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 PRDX5P30044 214 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 SOX5P35711 763 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 CPA2P48052 419 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 PIK3CGP48736 1102 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 GYS2P54840 703 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 RPS13P62277 151 aaKnown RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 KIF23Q02241 960 aaPredicted RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 MTX1Q13505 466 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 KIF22Q14807 665 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 NFATC4Q14934 902 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 IQCB1Q15051 598 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 CYP1B1Q16678 543 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 PRTGQ2VWP7 1150 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 UAP1L1Q3KQV9 507 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 LONRF3Q496Y0 759 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 AMOTQ4VCS5 1084 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 CT47A1Q5JQC4 288 aaPredicted RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 C9orf50Q5SZB4 431 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 TMTC4Q5T4D3 741 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 FAM160B1Q5W0V3 765 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 TMEM65Q6PI78 240 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 MTHFD1LQ6UB35 978 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 GSG1LQ6UXU4 331 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 DPY19L3Q6ZPD9 716 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 LHFPL2Q6ZUX7 228 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 B4GALNT4Q76KP1 1039 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 PPP1R32Q7Z5V6 425 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 BCDIN3DQ7Z5W3 292 aaKnown RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 ARHGAP30Q7Z6I6 1101 aaPredicted RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 KIAA0907Q7Z7F0 614 aaPredicted RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 PIP4P1Q86T03 277 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 TTC7BQ86TV6 843 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 CUZD1Q86UP6 607 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 CAND1Q86VP6 1230 aaKnown RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 LIX1LQ8IVB5 337 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 IZUMO1Q8IYV9 350 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 MMP21Q8N119 569 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 CPA6Q8N4T0 437 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 SIRT6Q8N6T7 355 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 C3orf20Q8ND61 904 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 WDR66Q8TBY9 1149 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 ZNF398Q8TD17 642 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 WFIKKN2Q8TEU8 576 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 COG1Q8WTW3 980 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 NUDCD2Q8WVJ2 157 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 JADE3Q92613 823 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 DDX17Q92841 729 aaKnown RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 ZNF479Q96JC4 524 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 ZFYVE19Q96K21 471 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 HS6ST2Q96MM7 605 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 NLRP4Q96MN2 994 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 MEIS3Q99687 375 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 NTPCRQ9BSD7 190 aaKnown RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 TMEM204Q9BSN7 226 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 THAP7Q9BT49 309 aaPredicted RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 CAAP1Q9H8G2 361 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 ZNF277Q9NRM2 450 aaPredicted RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 ST6GALNAC1Q9NSC7 600 aaPredicted RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 RLIMQ9NVW2 624 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 MKS1Q9NXB0 559 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 LPAR3Q9UBY5 353 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 MCM8Q9UJA3 840 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 TUBD1Q9UJT1 453 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 AMFRQ9UKV5 643 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 NDRG4Q9ULP0 352 aaKnown RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 IPPQ9Y573 584 aa0.75□□□□□ -2.29
SNORD28-201ENST00000384706 ZSCAN21Q9Y5A6 473 aaPredicted RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 MRPL42Q9Y6G3 142 aaKnown RBP0.75□□□□□ -2.29
SNORD28-201ENST00000384706 EVPLQ92817 2033 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 NOTCH2Q04721 2471 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 KLHL33A6NCF5 533 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 PSMD9O00233 223 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 CLIC1O00299 241 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ACOT8O14734 319 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ERC2O15083 957 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 XPOTO43592 962 aaKnown RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 SOCS5O75159 536 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 TJP3O95049 919 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 NDUFB8O95169 186 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 PAPSS2O95340 614 aaPredicted RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 EYA4O95677 639 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 FGAP02671 866 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 AHSGP02765 367 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ATXN1LP0C7T5 689 aaKnown RBP0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms