RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 SH3PXD2AQ5TCZ1 1133 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 TRNP1Q6NT89 227 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 CYP4V2Q6ZWL3 525 aaPredicted RBP11.45□□□□□ -0.58
BEST1-201ENST00000378043 TTC13Q8NBP0 860 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 LRRC8CQ8TDW0 803 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 DCAKDQ8WVC6 231 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 RSAD2Q8WXG1 361 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 LRRC37BQ96QE4 947 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 FRMD8P1Q9BZ68 369 aaPredicted RBP11.45□□□□□ -0.58
BEST1-201ENST00000378043 INO80BQ9C086 356 aaPredicted RBP11.45□□□□□ -0.58
BEST1-201ENST00000378043 SSU72Q9NP77 194 aaKnown RBP11.45□□□□□ -0.58
BEST1-201ENST00000378043 PPME1Q9Y570 386 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 APOC4-APOC2K7ER74 178 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 GAS2O43903 313 aaKnown RBP11.45□□□□□ -0.58
BEST1-201ENST00000378043 ANP32DO95626 131 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 APOC2P02655 101 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 PGK2P07205 417 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 MBTD1Q05BQ5 628 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 PTPN11Q06124 597 aaPredicted RBP11.45□□□□□ -0.58
BEST1-201ENST00000378043 MMRN1Q13201 1228 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 ZNF667Q5HYK9 610 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 CELF3Q5SZQ8 465 aaKnown RBP11.45□□□□□ -0.58
BEST1-201ENST00000378043 POTEAQ6S8J7 498 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 RPAINQ86UA6 219 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 MCRS1Q96EZ8 462 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 TMEM237Q96Q45 408 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 C2orf40Q9H1Z8 148 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 CXorf56Q9H5V9 222 aa11.45□□□□□ -0.58
BEST1-201ENST00000378043 LTBP3Q9NS15 1303 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 GOLGA8RI6L899 631 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 NDC80O14777 642 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 MED7O43513 233 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 CSDE1O75534 798 aaKnown RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 MICAL2O94851 1124 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 TRUB2O95900 331 aaKnown RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 RBP3P10745 1247 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 TARSP26639 723 aaKnown RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 GPD2P43304 727 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 CLCN3P51790 818 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 EIF3EP60228 445 aaKnown RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 HHATQ5VTY9 493 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 NPNTQ6UXI9 565 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 PLPPR4Q7Z2D5 763 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 KCTD6Q8NC69 237 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 TCP10LQ8TDR4 215 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 HSPH1Q92598 858 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 KLF6Q99612 283 aaPredicted RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 SLC17A7Q9P2U7 560 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 PPP1R1BQ9UD71 204 aaPredicted RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 XPO7Q9UIA9 1087 aaKnown RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 USP18Q9UMW8 372 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 TRIP11Q15643 1979 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 A0A1B0GUA9 196 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 LACTBL1A8MY62 500 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 CILPO75339 1184 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 ENDOD1O94919 500 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 ZWINTO95229 277 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 ITGB3P05106 788 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 ELF1P32519 619 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 GABRB2P47870 512 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 DPYSL3Q14195 570 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 BBS9Q3SYG4 887 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 VSIG1Q86XK7 387 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 RFX6Q8HWS3 928 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 AGGF1Q8N302 714 aaeCLIP11.44□□□□□ -0.58
BEST1-201ENST00000378043 BANPQ8N9N5 519 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 SPATA18Q8TC71 538 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 COPS5Q92905 334 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 SLC7A6OSQ96CW6 309 aaPredicted RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 PIWIL1Q96J94 861 aaKnown RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 CALN1Q9BXU9 219 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 ASCC2Q9H1I8 757 aaPredicted RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 LRMDAQ9H2I8 198 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 SYNCQ9H7C4 482 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 GPRC5DQ9NZD1 345 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 WDR35Q9P2L0 1181 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 KANSL3Q9P2N6 904 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 HAO1Q9UJM8 370 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.44□□□□□ -0.58
BEST1-201ENST00000378043 TNFSF13BQ9Y275 285 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 OTOFQ9HC10 1997 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 CNMDO75829 334 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 RPSAP08865 295 aaKnown RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 PHBP35232 272 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 MAP1SQ66K74 1059 aaPredicted RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 JADE1Q6IE81 842 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 EFCAB12Q6NXP0 572 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 NSMCE1Q8WV22 266 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 N4BP2L2Q92802 583 aaPredicted RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 PTPRN2Q92932 1015 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 TMEM176AQ96HP8 235 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 RPF1Q9H9Y2 349 aaKnown RBP11.44□□□□□ -0.58
BEST1-201ENST00000378043 IFT122Q9HBG6 1241 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 TXLNGQ9NUQ3 528 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 CHMP2BQ9UQN3 213 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 C15orf41Q9Y2V0 281 aa11.44□□□□□ -0.58
BEST1-201ENST00000378043 WDR91A4D1P6 747 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 NOP56O00567 594 aaKnown RBP11.43□□□□□ -0.58
BEST1-201ENST00000378043 CYP3A5P20815 502 aa11.43□□□□□ -0.58
BEST1-201ENST00000378043 CCND1P24385 295 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms