RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ADGRF2Q8IZF7 708 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 RIN3Q8TB24 985 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 DTX3LQ8TDB6 740 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 RBP3P10745 1247 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 PCNAP12004 261 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 TNNI3P19429 210 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 COMTP21964 271 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 TGM2P21980 687 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 TRIM28Q13263 835 aaKnown RBP16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 C1orf131Q8NDD1 294 aaKnown RBP16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 E2F7Q96AV8 911 aa16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 AKAP7Q9P0M2 348 aaPredicted RBP16.27■□□□□ 0.2
NUCKS1-201ENST00000367142 YWHAQP27348 245 aa16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 NUP62P37198 522 aaPredicted RBP16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 PLOD1Q02809 727 aaPredicted RBP16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 CUL2Q13617 745 aa16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 CYP51A1Q16850 503 aa16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 SHROOM1Q2M3G4 852 aaPredicted RBP16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 OSGEPL1Q9H4B0 414 aa16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 TUBE1Q9UJT0 475 aa16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 PCDH8O95206 1070 aa16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 JAK1P23458 1154 aa16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 ELAVL2Q12926 359 aaKnown RBP16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 ITGA9Q13797 1035 aa16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 AMHR2Q16671 573 aa16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 SLC16A10Q8TF71 515 aa16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 LRRC1Q9BTT6 524 aa16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 TARS2Q9BW92 718 aaKnown RBP16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 KIAA1257Q9ULG3 409 aa16.27■□□□□ 0.19
NUCKS1-201ENST00000367142 UBE2Q2LH0YL09 131 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 YWHAZP63104 245 aaKnown RBP16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 E2F4Q16254 413 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 GSTA3Q16772 222 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 ELOA2Q8IYF1 753 aaPredicted RBP16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 CENPLQ8N0S6 344 aaPredicted RBP16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 OSCP1Q8WVF1 389 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 ZNF333Q96JL9 665 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 MYMKA6NI61 221 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 ICAM1P05362 532 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 GLRA4Q5JXX5 417 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 OTOAQ7RTW8 1153 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 PRRG3Q9BZD7 231 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 ROPN1BQ9BZX4 212 aaPredicted RBP16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 CIPCQ9C0C6 399 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 ROPN1Q9HAT0 212 aaPredicted RBP16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 V9GYQ6 96 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 DGKIO75912 1065 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 BMP10O95393 424 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 MYL4P12829 197 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 CHI3L2Q15782 390 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 DENND5BQ6ZUT9 1274 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 CNDP1Q96KN2 507 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 KCTD10Q9H3F6 313 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 EVA1BQ9NVM1 165 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 FBXL21Q9UKT6 434 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 MAPK9P45984 424 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 FNTAP49354 379 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 ITGA8P53708 1063 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 LAYNQ6UX15 382 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 MS4A14Q96JA4 679 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 ADGRE3Q9BY15 652 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 MANSC1Q9H8J5 431 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 JMJD4Q9H9V9 463 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 LHX1P48742 406 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 GEMIN4P57678 1058 aaKnown RBP16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 CASP10Q92851 521 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 PDGFCQ9NRA1 345 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 ADARB2Q9NS39 739 aaKnown RBP16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 NRKQ7Z2Y5 1582 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 MGAT4DA6NG13 374 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 VDRP11473 427 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 RPA1P27694 616 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 GUCY1A3Q02108 690 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 SGCGQ13326 291 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 CLEC10AQ8IUN9 316 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 CCNJLQ8IV13 435 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 XPO6Q96QU8 1125 aaKnown RBP16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 PI4K2AQ9BTU6 479 aa16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 DBR1Q9UK59 544 aaKnown RBP16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 USP15Q9Y4E8 981 aaPredicted RBP16.26■□□□□ 0.19
NUCKS1-201ENST00000367142 ALBP02768 609 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 EFEMP1Q12805 493 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 PGS1Q32NB8 556 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 ICE2Q659A1 982 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 MPZL3Q6UWV2 235 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 PRPF39Q86UA1 669 aaKnown RBP16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 JAMLQ86YT9 394 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 CNBD2Q96M20 576 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 MRPS26Q9BYN8 205 aaKnown RBP16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 OSBPL6Q9BZF3 934 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 SENP2Q9HC62 589 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 TSPOAP1O95153 1857 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 SLC12A8A0AV02 714 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 NKRFO15226 690 aaKnown RBP eCLIP16.25■□□□□ 0.191e-8■■□□□ 12.8
NUCKS1-201ENST00000367142 MDH1P40925 334 aaKnown RBP16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 SERPINB8P50452 374 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 DAB2IPQ5VWQ8 1189 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 TMC7Q7Z402 723 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 DRG1Q9Y295 367 aaKnown RBP16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 NCF1BA6NI72 391 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms