RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 SV2AQ7L0J3 742 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 ARHGEF19Q8IW93 802 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 TRIM7Q9C029 511 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 NXF3Q9H4D5 531 aaKnown RBP13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 UBE2TQ9NPD8 197 aaPredicted RBP13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 SNTG2Q9NY99 539 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 GGT7Q9UJ14 662 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 GTF3C4Q9UKN8 822 aa13.33□□□□□ -0.27
RTFDC1-202ENST00000357348 A6NHS1 94 aa13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 MAPK13O15264 365 aa13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 CHKAP35790 457 aa13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 TFAMQ00059 246 aaKnown RBP13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 MGAT3Q09327 533 aa13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 PSMD6Q15008 389 aa13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 C11orf91Q3C1V1 193 aa13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 SLC27A1Q6PCB7 646 aa13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 KIF2BQ8N4N8 673 aa13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 TAS1R2Q8TE23 839 aa13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 EPS8L1Q8TE68 723 aa13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 SEMA4DQ92854 862 aa13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 UTP4Q969X6 686 aaKnown RBP13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 RPF1Q9H9Y2 349 aaKnown RBP13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 KLK14Q9P0G3 267 aa13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 UVRAGQ9P2Y5 699 aa13.33□□□□□ -0.28
RTFDC1-202ENST00000357348 TMEM110-MUSTN1A8MSY1 372 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 E7ENQ6 273 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 MCF2P10911 925 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 BRAFP15056 766 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 ATP2A2P16615 1042 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 GNAZP19086 355 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 MAN1A1P33908 653 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 ATP11AP98196 1134 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 KRT17Q04695 432 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 ANKRD20A2Q5SQ80 823 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 ANKRD20A1Q5TYW2 823 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 ANKRD20A3Q5VUR7 823 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 ARHGEF18Q6ZSZ5 1173 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 ECHDC2Q86YB7 292 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 BRSK2Q8IWQ3 736 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 FAM71AQ8IYT1 594 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 SLC43A3Q8NBI5 491 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 ZNF564Q8TBZ8 553 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 MGARPQ8TDB4 240 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 TMC2Q8TDI7 906 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 TMEM237Q96Q45 408 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 MTMR12Q9C0I1 747 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 LRMDAQ9H2I8 198 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 KLHL14Q9P2G3 628 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 PADI3Q9ULW8 664 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 LACTBL1A8MY62 500 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 ATP5HO75947 161 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 ACSL3O95573 720 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 TAC1P20366 129 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 PTPN11Q06124 597 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 TRIM71Q2Q1W2 868 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 TDRD10Q5VZ19 366 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 KRT39Q6A163 491 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 USP37Q86T82 979 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 NOP9Q86U38 636 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 CCDC25Q86WR0 208 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 FAM126BQ8IXS8 530 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 SNF8Q96H20 258 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 RAB3IPQ96QF0 476 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 TGS1Q96RS0 853 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 NINJ2Q9NZG7 142 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 NEU2Q9Y3R4 380 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 LRRC42Q9Y546 428 aa13.32□□□□□ -0.28
RTFDC1-202ENST00000357348 LUC7L3O95232 432 aaKnown RBP13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 CDK7P50613 346 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 CCNHP51946 323 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 LPIN1Q14693 890 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 SLC10A6Q3KNW5 377 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 GLRA4Q5JXX5 417 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 SPDYAQ5MJ70 313 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 FBXO47Q5MNV8 452 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 PPP1R21Q6ZMI0 780 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 RGS9BPQ6ZS82 235 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 EP400NLQ6ZTU2 488 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 CPNE8Q86YQ8 564 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 CYP4X1Q8N118 509 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 ARMC2Q8NEN0 867 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 MAIP1Q8WWC4 291 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 PAWRQ96IZ0 340 aaKnown RBP13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 ACAP3Q96P50 834 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 TMEM8AQ9HCN3 771 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 TXLNGQ9NUQ3 528 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 CTNNAL1Q9UBT7 734 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 STARD13Q9Y3M8 1113 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 UMODL1Q5DID0 1318 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 TET1Q8NFU7 2136 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 SCN5AQ14524 2016 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 MEIS3P2A8K0S8 358 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 SPOPO43791 374 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 CDH16O75309 829 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 NFICP08651 508 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 SLC18A1P54219 525 aa13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 YARSP54577 528 aaKnown RBP13.31□□□□□ -0.28
RTFDC1-202ENST00000357348 FMO1Q01740 532 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms