RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 BACE1P56817 501 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 GAD2Q05329 585 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 DGKZQ13574 1117 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 DNAL1Q4LDG9 190 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 MDH1BQ5I0G3 518 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 LDHDQ86WU2 507 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 PDSS2Q86YH6 399 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 ZNF280CQ8ND82 737 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 DCPSQ96C86 337 aaKnown RBP18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 MTBPQ96DY7 904 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 STRIP2Q9ULQ0 834 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 ZSCAN9O15535 394 aaPredicted RBP18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 MT-ND3P03897 115 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 ASLP04424 464 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 ATF7P17544 494 aaPredicted RBP18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 SCNN1BP51168 640 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 USP46P62068 366 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 MAP7Q14244 749 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 SNRNP35Q16560 246 aaKnown RBP18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 NCAPG2Q86XI2 1143 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 SLC25A41Q8N5S1 370 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 FBXL13Q8NEE6 735 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 APOPT1Q96IL0 206 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 SLITRK1Q96PX8 696 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 WDR83Q9BRX9 315 aaKnown RBP18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 RAB20Q9NX57 234 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 TAGLN3Q9UI15 199 aa18.93■□□□□ 0.62
CLSTN3-202ENST00000331148 MYH11P35749 1972 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 SPECC1L-ADORA2AF8WAN1 911 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 NDC80O14777 642 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 CFBP00751 764 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 VCPP55072 806 aaKnown RBP18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 GRM2Q14416 872 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 MSS51Q4VC12 460 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 ATP13A4Q4VNC1 1196 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 C3orf62Q6ZUJ4 267 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 ADGRG6Q86SQ4 1221 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 RASSF3Q86WH2 238 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 C11orf70Q9BRQ4 267 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 PCDH9Q9HC56 1237 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 KCNK4Q9NYG8 393 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 DRG1Q9Y295 367 aaKnown RBP18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 FARP1Q9Y4F1 1045 aaPredicted RBP18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 ZHX2Q9Y6X8 837 aa18.92■□□□□ 0.62
CLSTN3-202ENST00000331148 FKBP6O75344 327 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 POLR2MP0CAP2 368 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 MCCD1P59942 119 aaPredicted RBP18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 KDSRQ06136 332 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 OASLQ15646 514 aaKnown RBP18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 FNBP1LQ5T0N5 605 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 LIN9Q5TKA1 542 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 MFSD7Q6UXD7 560 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 CNTN3Q9P232 1028 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 PPARGC1AQ9UBK2 798 aaKnown RBP18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 SSC5DA1L4H1 1573 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 SMIM31A0A1B0GVY4 71 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 IFNB1P01574 187 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 KRT1P04264 644 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 ICAM1P05362 532 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 FAM200BP0CF97 657 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 MAMLD1Q13495 774 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 HSF5Q4G112 596 aaPredicted RBP18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 KYAT3Q6YP21 454 aaKnown RBP18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 SATL1Q86VE3 508 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 SULF1Q8IWU6 871 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 RCOR2Q8IZ40 523 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 FAM172AQ8WUF8 416 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 LENG1Q96BZ8 264 aaPredicted RBP18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 HAUS1Q96CS2 278 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 SERAC1Q96JX3 654 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 WDR11Q9BZH6 1224 aa18.91■□□□□ 0.62
CLSTN3-202ENST00000331148 ATP9BO43861 1147 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 ITGA2BP08514 1039 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 MED21Q13503 144 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 PRKG1Q13976 671 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 ANKRD22Q5VYY1 191 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 HAUS6Q7Z4H7 955 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 DHDDSQ86SQ9 333 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 RHPN2Q8IUC4 686 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 FBXO36Q8NEA4 188 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 AGBL1Q96MI9 1066 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 TMEM121Q9BTD3 319 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 RPAP3Q9H6T3 665 aaPredicted RBP18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 CCPG1Q9ULG6 757 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 SGK1O00141 431 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 KLF11O14901 512 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 ZNF862O60290 1169 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 USP2O75604 605 aaPredicted RBP18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 TCF4P15884 667 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 GTF2BQ00403 316 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 ASPHQ12797 758 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 MSLNQ13421 630 aaPredicted RBP18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 SFT2D3Q587I9 215 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 NOL9Q5SY16 702 aaKnown RBP18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 ZFYVE27Q5T4F4 411 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 AAGABQ6PD74 315 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 ZNF677Q86XU0 584 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 MPP4Q96JB8 637 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 ZNF577Q9BSK1 485 aa18.9■□□□□ 0.62
CLSTN3-202ENST00000331148 PI4K2AQ9BTU6 479 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms