RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SPATA31C2B4DYI2 1134 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 ADM5C9JUS6 153 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 RGS20O76081 388 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 RFC5P40937 340 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 NXNQ6DKJ4 435 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 MPZL3Q6UWV2 235 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 WDR49Q8IV35 697 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 NDUFAF2Q8N183 169 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 GMLQ99445 158 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 SPATC1LQ9H0A9 340 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 C2orf40Q9H1Z8 148 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 SNX25Q9H3E2 840 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 SLC17A7Q9P2U7 560 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 E5RJQ4 531 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 DDNO94850 711 aaPredicted RBP16.6■□□□□ 0.25
SMAD6-201ENST00000288840 TAC1P20366 129 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 ARL4AP40617 200 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 OGDHQ02218 1023 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 GOLGA7BQ2TAP0 167 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 JADE1Q6IE81 842 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 ECHDC2Q86YB7 292 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 ZNF75CPQ92670 426 aaPredicted RBP16.6■□□□□ 0.25
SMAD6-201ENST00000288840 GRAMD1AQ96CP6 724 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 TSNARE1Q96NA8 513 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 ASCC2Q9H1I8 757 aaPredicted RBP16.6■□□□□ 0.25
SMAD6-201ENST00000288840 ADAM7Q9H2U9 754 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 PDGFCQ9NRA1 345 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 CCDC160A6NGH7 325 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 NDST1P52848 882 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 SDCCAG8Q86SQ7 713 aaPredicted RBP16.6■□□□□ 0.25
SMAD6-201ENST00000288840 SMC1BQ8NDV3 1235 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 MAP3K20Q9NYL2 800 aaKnown RBP16.6■□□□□ 0.25
SMAD6-201ENST00000288840 AFG3L2Q9Y4W6 797 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 hCG_1818297A0A087WSY0 165 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 PLA2G6O60733 806 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 RASSF9O75901 435 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 ASS1P00966 412 aaKnown RBP16.6■□□□□ 0.25
SMAD6-201ENST00000288840 WDR4P57081 412 aaKnown RBP16.6■□□□□ 0.25
SMAD6-201ENST00000288840 TTLL4Q14679 1199 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 FAM47CQ5HY64 1035 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 PPP1R2P3Q6NXS1 205 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 CES3Q6UWW8 571 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 ANKS1BQ7Z6G8 1248 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 ATP2A3Q93084 1043 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 CLMNQ96JQ2 1002 aa16.6■□□□□ 0.25
SMAD6-201ENST00000288840 COL22A1Q8NFW1 1626 aaPredicted RBP16.59■□□□□ 0.25
SMAD6-201ENST00000288840 APOL1O14791 398 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 STK10O94804 968 aaKnown RBP16.59■□□□□ 0.25
SMAD6-201ENST00000288840 INSRRP14616 1297 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 GPD1P21695 349 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 HADHBP55084 474 aaKnown RBP16.59■□□□□ 0.25
SMAD6-201ENST00000288840 SIX1Q15475 284 aaPredicted RBP16.59■□□□□ 0.25
SMAD6-201ENST00000288840 HEATR6Q6AI08 1181 aaKnown RBP16.59■□□□□ 0.25
SMAD6-201ENST00000288840 CATSPERGQ6ZRH7 1159 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 FAM172AQ8WUF8 416 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 SEC14L1Q92503 715 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 ST6GALNAC4Q9H4F1 302 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 LAMB1P07942 1786 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 AHDC1Q5TGY3 1603 aaPredicted RBP16.59■□□□□ 0.25
SMAD6-201ENST00000288840 LOC100653049A0A140TA62 436 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 H3BRJ5 948 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 ENTPD5O75356 428 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 KRT34O76011 436 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 MICAL2O94851 1124 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 GHRP10912 638 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 KDELR1P24390 212 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 ZC3H12AQ5D1E8 599 aaKnown RBP16.59■□□□□ 0.25
SMAD6-201ENST00000288840 FNBP1LQ5T0N5 605 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 PLEKHA7Q6IQ23 1121 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 TRABD2AQ86V40 505 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 FAM131BQ86XD5 332 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 ALLCQ8N6M5 410 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 STRA6Q9BX79 667 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 OSBPL1AQ9BXW6 950 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 PCDH9Q9HC56 1237 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 FBXO6Q9NRD1 293 aaPredicted RBP16.59■□□□□ 0.25
SMAD6-201ENST00000288840 TSPAN16Q9UKR8 245 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 IRF6O14896 467 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 OSBPP22059 807 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 VGLL4Q14135 290 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 CYP1B1Q16678 543 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 RAPH1Q70E73 1250 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 RPAINQ86UA6 219 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 NTPCRQ9BSD7 190 aaKnown RBP16.59■□□□□ 0.25
SMAD6-201ENST00000288840 MECRQ9BV79 373 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 NENFQ9UMX5 172 aa16.59■□□□□ 0.25
SMAD6-201ENST00000288840 ATP9BO43861 1147 aa16.58■□□□□ 0.25
SMAD6-201ENST00000288840 DNAJC8O75937 253 aaPredicted RBP16.58■□□□□ 0.25
SMAD6-201ENST00000288840 MYL2P10916 166 aa16.58■□□□□ 0.25
SMAD6-201ENST00000288840 RBL1P28749 1068 aa16.58■□□□□ 0.25
SMAD6-201ENST00000288840 SERPINB3P29508 390 aa16.58■□□□□ 0.25
SMAD6-201ENST00000288840 ABCG1P45844 678 aa16.58■□□□□ 0.25
SMAD6-201ENST00000288840 IREB2P48200 963 aaKnown RBP16.58■□□□□ 0.25
SMAD6-201ENST00000288840 ATXN3P54252 364 aaPredicted RBP16.58■□□□□ 0.25
SMAD6-201ENST00000288840 TAP1Q03518 808 aa16.58■□□□□ 0.25
SMAD6-201ENST00000288840 MTFR1Q15390 333 aa16.58■□□□□ 0.25
SMAD6-201ENST00000288840 CHI3L2Q15782 390 aa16.58■□□□□ 0.25
SMAD6-201ENST00000288840 METTL7BQ6UX53 244 aa16.58■□□□□ 0.25
SMAD6-201ENST00000288840 B3GNT9Q6UX72 402 aa16.58■□□□□ 0.25
SMAD6-201ENST00000288840 PHF13Q86YI8 300 aaPredicted RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms