RNA–Protein interactions for RNA: ENST00000254351.8

SDC1-201, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC1, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-201ENST00000254351 LIN9Q5TKA1 542 aa15□□□□□ -0.01
SDC1-201ENST00000254351 FBXL19Q6PCT2 694 aa15□□□□□ -0.01
SDC1-201ENST00000254351 MYLK4Q86YV6 388 aaPredicted RBP15□□□□□ -0.01
SDC1-201ENST00000254351 SIAH1Q8IUQ4 282 aa15□□□□□ -0.01
SDC1-201ENST00000254351 OGFOD1Q8N543 542 aa15□□□□□ -0.01
SDC1-201ENST00000254351 FAM210AQ96ND0 272 aa15□□□□□ -0.01
SDC1-201ENST00000254351 TMEM206Q9H813 350 aa15□□□□□ -0.01
SDC1-201ENST00000254351 SEL1LQ9UBV2 794 aa15□□□□□ -0.01
SDC1-201ENST00000254351 ZHX2Q9Y6X8 837 aa15□□□□□ -0.01
SDC1-201ENST00000254351 A8MXQ7 604 aa15□□□□□ -0.01
SDC1-201ENST00000254351 HNRNPDLO14979 420 aaKnown RBP15□□□□□ -0.01
SDC1-201ENST00000254351 PEX1O43933 1283 aa15□□□□□ -0.01
SDC1-201ENST00000254351 SUPT3HO75486 399 aa15□□□□□ -0.01
SDC1-201ENST00000254351 CD48P09326 243 aa15□□□□□ -0.01
SDC1-201ENST00000254351 NCF2P19878 526 aaPredicted RBP15□□□□□ -0.01
SDC1-201ENST00000254351 BAG6P46379 1132 aa15□□□□□ -0.01
SDC1-201ENST00000254351 MSLNQ13421 630 aaPredicted RBP15□□□□□ -0.01
SDC1-201ENST00000254351 SLC15A2Q16348 729 aa15□□□□□ -0.01
SDC1-201ENST00000254351 GSTA3Q16772 222 aa15□□□□□ -0.01
SDC1-201ENST00000254351 CEP55Q53EZ4 464 aa15□□□□□ -0.01
SDC1-201ENST00000254351 EFHC2Q5JST6 749 aa15□□□□□ -0.01
SDC1-201ENST00000254351 C16orf46Q6P387 395 aa15□□□□□ -0.01
SDC1-201ENST00000254351 NME8Q8N427 588 aa15□□□□□ -0.01
SDC1-201ENST00000254351 GALNT4Q8N4A0 578 aa15□□□□□ -0.01
SDC1-201ENST00000254351 GLT8D2Q9H1C3 349 aa15□□□□□ -0.01
SDC1-201ENST00000254351 ZNF219Q9P2Y4 722 aaPredicted RBP15□□□□□ -0.01
SDC1-201ENST00000254351 SLC24A2Q9UI40 661 aa15□□□□□ -0.01
SDC1-201ENST00000254351 COMMD3-BMI1R4GMX3 469 aa15□□□□□ -0.01
SDC1-201ENST00000254351 NAV1Q8NEY1 1877 aa15□□□□□ -0.01
SDC1-201ENST00000254351 CST8O60676 142 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 FOSP01100 380 aaPredicted RBP14.99□□□□□ -0.01
SDC1-201ENST00000254351 ASLP04424 464 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 MORF4L2Q15014 288 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 DHDDSQ86SQ9 333 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 LCA5Q86VQ0 697 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 NUDCD3Q8IVD9 361 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 UNC45BQ8IWX7 931 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 ARHGAP18Q8N392 663 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 LENG1Q96BZ8 264 aaPredicted RBP14.99□□□□□ -0.01
SDC1-201ENST00000254351 ERLEC1Q96DZ1 483 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 TMOD2Q9NZR1 351 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 TCEAL9Q9UHQ7 104 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 PRR12Q9ULL5 1215 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 TCRBV9S1A1TA0A576 114 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 PIK3R2O00459 728 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 GNA15P30679 374 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 EML3Q32P44 896 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 BRDTQ58F21 947 aaPredicted RBP14.99□□□□□ -0.01
SDC1-201ENST00000254351 XKR9Q5GH70 373 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 SPOCD1Q6ZMY3 1216 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 TDRPQ86YL5 185 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 PDIK1LQ8N165 341 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 CLMNQ96JQ2 1002 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 TUBB6Q9BUF5 446 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 HSFX1Q9UBD0 423 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 TAGLN3Q9UI15 199 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 ZSCAN9O15535 394 aaPredicted RBP14.99□□□□□ -0.01
SDC1-201ENST00000254351 DBN1Q16643 649 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 TRMT5Q32P41 509 aaKnown RBP14.99□□□□□ -0.01
SDC1-201ENST00000254351 ADGRD1Q6QNK2 874 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 ZBTB46Q86UZ6 589 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 TEKT3Q9BXF9 490 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 PIH1D1Q9NWS0 290 aaKnown RBP14.99□□□□□ -0.01
SDC1-201ENST00000254351 STK32BQ9NY57 414 aa14.99□□□□□ -0.01
SDC1-201ENST00000254351 RPL26L1Q9UNX3 145 aaKnown RBP14.99□□□□□ -0.01
SDC1-201ENST00000254351 F7P08709 466 aaPredicted RBP14.98□□□□□ -0.01
SDC1-201ENST00000254351 CRABP2P29373 138 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 RPL22P35268 128 aaKnown RBP14.98□□□□□ -0.01
SDC1-201ENST00000254351 WNT7BP56706 349 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 OGDHQ02218 1023 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 FOLH1Q04609 750 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 MOXD1Q6UVY6 613 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 NET1Q7Z628 596 aaPredicted RBP14.98□□□□□ -0.01
SDC1-201ENST00000254351 MAP7D3Q8IWC1 876 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 EXD1Q8NHP7 514 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 E2F7Q96AV8 911 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 HSPBAP1Q96EW2 488 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 OLFM3Q96PB7 478 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 CALN1Q9BXU9 219 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 S100A14Q9HCY8 104 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 XPNPEP1Q9NQW7 623 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 C15orf38-AP3S2A0A0A6YYH1 394 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 A0A1B0GTW7 788 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 CXorf49A8MYA2 514 aaPredicted RBP14.98□□□□□ -0.01
SDC1-201ENST00000254351 TM9SF1O15321 606 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 BUD23O43709 281 aaKnown RBP14.98□□□□□ -0.01
SDC1-201ENST00000254351 WEE2P0C1S8 567 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 PCSK6P29122 969 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 VCPP55072 806 aaKnown RBP14.98□□□□□ -0.01
SDC1-201ENST00000254351 TAF5Q15542 800 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 UGCGQ16739 394 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 EFHC1Q5JVL4 640 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 DPH6Q7L8W6 267 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 ARPINQ7Z6K5 226 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 PDSS2Q86YH6 399 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 SLC9A9Q8IVB4 645 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 KATNAL2Q8IYT4 538 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 DTNBP1Q96EV8 351 aa14.98□□□□□ -0.01
SDC1-201ENST00000254351 PRPF18Q99633 342 aaKnown RBP14.98□□□□□ -0.01
SDC1-201ENST00000254351 MAN1C1Q9NR34 630 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms