RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 CCDC166P0CW27 439 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 RXRBP28702 533 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 RFC4P35249 363 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 CASP4P49662 377 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 CACNB2Q08289 660 aaPredicted RBP15.72■□□□□ 0.11
PMPCB-201ENST00000249269 PTK6Q13882 451 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 RRP1BQ14684 758 aaKnown RBP15.72■□□□□ 0.11
PMPCB-201ENST00000249269 KIRREL3Q8IZU9 778 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 IL17RDQ8NFM7 739 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 LENG9Q96B70 501 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 ARHGEF26Q96DR7 871 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 PRPF18Q99633 342 aaKnown RBP15.72■□□□□ 0.11
PMPCB-201ENST00000249269 ZPBPQ9BS86 351 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 AMNQ9BXJ7 453 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 SCPEP1Q9HB40 452 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 NKIRAS1Q9NYS0 192 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 COG5Q9UP83 839 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 STARD13Q9Y3M8 1113 aa15.72■□□□□ 0.11
PMPCB-201ENST00000249269 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.71■□□□□ 0.11
PMPCB-201ENST00000249269 TMEM120BA0PK00 339 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 IGF2BP3O00425 579 aaKnown RBP eCLIP15.71■□□□□ 0.11
PMPCB-201ENST00000249269 MEIS2O14770 477 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 SORBS3O60504 671 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 USP2O75604 605 aaPredicted RBP15.71■□□□□ 0.11
PMPCB-201ENST00000249269 HLA-DOAP06340 250 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 AKR1B1P15121 316 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 CENPCQ03188 943 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 BFSP1Q12934 665 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 C1orf186Q6ZWK4 172 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 ZNF720Q7Z2F6 126 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 SNF8Q96H20 258 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 LRMDAQ9H2I8 198 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 ANKEF1Q9NU02 776 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 AGAP1Q9UPQ3 857 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 LRRC42Q9Y546 428 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 IGSF9BQ9UPX0 1349 aa15.71■□□□□ 0.11
PMPCB-201ENST00000249269 ARHGAP10A1A4S6 786 aa15.71■□□□□ 0.1
PMPCB-201ENST00000249269 USP17L10C9JJH3 530 aa15.71■□□□□ 0.1
PMPCB-201ENST00000249269 GAS8O95995 478 aa15.71■□□□□ 0.1
PMPCB-201ENST00000249269 S100A1P23297 94 aa15.71■□□□□ 0.1
PMPCB-201ENST00000249269 IL9RQ01113 521 aa15.71■□□□□ 0.1
PMPCB-201ENST00000249269 PLOD1Q02809 727 aaPredicted RBP15.71■□□□□ 0.1
PMPCB-201ENST00000249269 PTP4A2Q12974 167 aa15.71■□□□□ 0.1
PMPCB-201ENST00000249269 DPP8Q6V1X1 898 aaPredicted RBP15.71■□□□□ 0.1
PMPCB-201ENST00000249269 LMO3Q8TAP4 145 aa15.71■□□□□ 0.1
PMPCB-201ENST00000249269 CCDC106Q9BWC9 280 aa15.71■□□□□ 0.1
PMPCB-201ENST00000249269 STRA6Q9BX79 667 aa15.71■□□□□ 0.1
PMPCB-201ENST00000249269 TMEM206Q9H813 350 aa15.71■□□□□ 0.1
PMPCB-201ENST00000249269 PPP1R14DQ9NXH3 145 aa15.71■□□□□ 0.1
PMPCB-201ENST00000249269 ATXN10Q9UBB4 475 aa15.71■□□□□ 0.1
PMPCB-201ENST00000249269 RTCBQ9Y3I0 505 aaKnown RBP15.71■□□□□ 0.1
PMPCB-201ENST00000249269 SLC12A8A0AV02 714 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 TCP11X1B4DZS4 312 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 PI4K2BG5E9Z4 385 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 DCTN3O75935 186 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 SMNDC1O75940 238 aaKnown RBP eCLIP15.7■□□□□ 0.1
PMPCB-201ENST00000249269 FTLP02792 175 aaPredicted RBP15.7■□□□□ 0.1
PMPCB-201ENST00000249269 RPL9P32969 192 aaKnown RBP15.7■□□□□ 0.1
PMPCB-201ENST00000249269 HADHAP40939 763 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 SLC1A1P43005 524 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 YARSP54577 528 aaKnown RBP15.7■□□□□ 0.1
PMPCB-201ENST00000249269 CACNB1Q02641 598 aaPredicted RBP15.7■□□□□ 0.1
PMPCB-201ENST00000249269 SGCGQ13326 291 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 SIX1Q15475 284 aaPredicted RBP15.7■□□□□ 0.1
PMPCB-201ENST00000249269 QRICH1Q2TAL8 776 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 WASHC2DQ5SRD0 308 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 VSTM1Q6UX27 236 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 SLC17A8Q8NDX2 589 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 OR52K2Q8NGK3 314 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 CEP70Q8NHQ1 597 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 ZNF398Q8TD17 642 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 HSD17B14Q9BPX1 270 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 TUBB6Q9BUF5 446 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 BRD9Q9H8M2 597 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 AGPAT3Q9NRZ7 376 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 ZIM2Q9NZV7 527 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 E2F3O00716 465 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 TRAFD1O14545 582 aaPredicted RBP15.7■□□□□ 0.1
PMPCB-201ENST00000249269 BACH1O14867 736 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 TRPA1O75762 1119 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 ABCB4P21439 1286 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 COMTP21964 271 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 ALDH3A1P30838 453 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 IDUAP35475 653 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 ACCSLQ4AC99 568 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 SLC27A3Q5K4L6 730 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 TTC27Q6P3X3 843 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 TDRPQ86YL5 185 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 GATAD2AQ86YP4 633 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 NACC1Q96RE7 527 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 TGIF2Q9GZN2 237 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 CDC42EP4Q9H3Q1 356 aaKnown RBP15.7■□□□□ 0.1
PMPCB-201ENST00000249269 GGA1Q9UJY5 639 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 DUSP12Q9UNI6 340 aa15.7■□□□□ 0.1
PMPCB-201ENST00000249269 SYNJ2BP-COX16A0A087WUM0 186 aa15.69■□□□□ 0.1
PMPCB-201ENST00000249269 POP4O95707 220 aaKnown RBP15.69■□□□□ 0.1
PMPCB-201ENST00000249269 GRIK5Q16478 980 aa15.69■□□□□ 0.1
PMPCB-201ENST00000249269 FAM196AQ6ZSG2 479 aa15.69■□□□□ 0.1
PMPCB-201ENST00000249269 USP51Q70EK9 711 aa15.69■□□□□ 0.1
PMPCB-201ENST00000249269 LPCAT2Q7L5N7 544 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms