RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CT47A1Q5JQC4 288 aaPredicted RBP13.45□□□□□ -0.26
LSM5-201ENST00000223084 PPP1R26Q5T8A7 1209 aaPredicted RBP13.45□□□□□ -0.26
LSM5-201ENST00000223084 ARID3BQ8IVW6 561 aaPredicted RBP13.45□□□□□ -0.26
LSM5-201ENST00000223084 FAM114A1Q8IWE2 563 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 PPM1KQ8N3J5 372 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 UBR7Q8N806 425 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 MAB21L3Q8N8X9 362 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 SCAMP5Q8TAC9 235 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 ENOX1Q8TC92 643 aaKnown RBP13.45□□□□□ -0.26
LSM5-201ENST00000223084 ELSPBP1Q96BH3 223 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 TRMT2BQ96GJ1 504 aaKnown RBP13.45□□□□□ -0.26
LSM5-201ENST00000223084 SMARCD1Q96GM5 515 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 HNRNPABQ99729 332 aaKnown RBP13.45□□□□□ -0.26
LSM5-201ENST00000223084 LRFN3Q9BTN0 628 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 GPR88Q9GZN0 384 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 DMAP1Q9NPF5 467 aaPredicted RBP13.45□□□□□ -0.26
LSM5-201ENST00000223084 ANO10Q9NW15 660 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 GCNT4Q9P109 453 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 UXTQ9UBK9 157 aaPredicted RBP13.45□□□□□ -0.26
LSM5-201ENST00000223084 HEPACAM2A8MVW5 462 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 KCNJ18B7U540 433 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 PRAMEF12O95522 483 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 CALCAP01258 141 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 FAM200BP0CF97 657 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 SRFP11831 508 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 TRIM21P19474 475 aaKnown RBP13.44□□□□□ -0.26
LSM5-201ENST00000223084 SLC9A1P19634 815 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 TBXAS1P24557 533 aaPredicted RBP13.44□□□□□ -0.26
LSM5-201ENST00000223084 TYRO3Q06418 890 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 KCNJ12Q14500 433 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 MAN2A1Q16706 1144 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 IER5LQ5T953 404 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 PHLDB3Q6NSJ2 640 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 GJB7Q6PEY0 223 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 VITQ6UXI7 678 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 HFE2Q6ZVN8 426 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 NUP93Q8N1F7 819 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 TTC39CQ8N584 583 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 MRPS31Q92665 395 aaKnown RBP13.44□□□□□ -0.26
LSM5-201ENST00000223084 JAKMIP2Q96AA8 810 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 KREMEN1Q96MU8 473 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 TUBGCP2Q9BSJ2 902 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 TTLL2Q9BWV7 592 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 TRPC7Q9HCX4 862 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 FBXL21Q9UKT6 434 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 PCDHB4Q9Y5E5 795 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 ZDBF2Q9HCK1 2354 aa13.44□□□□□ -0.26
LSM5-201ENST00000223084 C2orf78A6NCI8 922 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 RNF225M0QZC1 329 aaPredicted RBP13.43□□□□□ -0.26
LSM5-201ENST00000223084 TNFRSF10BO14763 440 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 PRKCSHP14314 528 aaPredicted RBP13.43□□□□□ -0.26
LSM5-201ENST00000223084 ACO1P21399 889 aaKnown RBP13.43□□□□□ -0.26
LSM5-201ENST00000223084 SLC5A3P53794 718 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 YWHAEP62258 255 aaKnown RBP13.43□□□□□ -0.26
LSM5-201ENST00000223084 TAF10Q12962 218 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 VWA3BQ502W6 1294 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 TCP11X2Q5H9J9 407 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 MIIPQ5JXC2 388 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 TMEM270Q6UE05 265 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 GBP6Q6ZN66 633 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 CLEC20AQ6ZU45 233 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 GPRIN1Q7Z2K8 1008 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 MON1AQ86VX9 555 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 CMTM8Q8IZV2 173 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 PBXIP1Q96AQ6 731 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 CEP295NLQ96MC4 621 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 LRRC3BQ96PB8 259 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 SLC22A12Q96S37 553 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 CYP2S1Q96SQ9 504 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 TRPV4Q9HBA0 871 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 CSNK1G1Q9HCP0 422 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 UBE2TQ9NPD8 197 aaPredicted RBP13.43□□□□□ -0.26
LSM5-201ENST00000223084 FANCLQ9NW38 375 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 TAB2Q9NYJ8 693 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 CA14Q9ULX7 337 aa13.43□□□□□ -0.26
LSM5-201ENST00000223084 NUP210Q8TEM1 1887 aaPredicted RBP13.42□□□□□ -0.26
LSM5-201ENST00000223084 PRR33A8MZF0 331 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 HHLA1C9JL84 531 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 DPYSL4O14531 572 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 ABL1P00519 1130 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 CD19P15391 556 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 YWHAQP27348 245 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 GCNT1Q02742 428 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 EXOC3L4Q17RC7 722 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 TRIM65Q6PJ69 517 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 SIX5Q8N196 739 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 TFAP2BQ92481 460 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 FBXO32Q969P5 355 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 DNAI2Q9GZS0 605 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 NDST4Q9H3R1 872 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 FAM124BQ9H5Z6 455 aaPredicted RBP13.42□□□□□ -0.26
LSM5-201ENST00000223084 SLC2A4RGQ9NR83 387 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 TRPM5Q9NZQ8 1165 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 CHORDC1Q9UHD1 332 aaPredicted RBP13.42□□□□□ -0.26
LSM5-201ENST00000223084 CCL26Q9Y258 94 aa13.42□□□□□ -0.26
LSM5-201ENST00000223084 KRBA1A5PL33 1030 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 ZNF840PA6NDX5 716 aa13.41□□□□□ -0.26
LSM5-201ENST00000223084 PES1O00541 588 aaKnown RBP13.41□□□□□ -0.26
LSM5-201ENST00000223084 RTN3O95197 1032 aaPredicted RBP13.41□□□□□ -0.26
LSM5-201ENST00000223084 NPR3P17342 541 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms