RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 FUKQ8N0W3 1084 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 MGARPQ8TDB4 240 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 PLCD4Q9BRC7 762 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 KCNK9Q9NPC2 374 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 METTL5Q9NRN9 209 aaKnown RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 KLC4Q9NSK0 619 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 TBK1Q9UHD2 729 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 ZMYND8Q9ULU4 1186 aaPredicted RBP9.91□□□□□ -0.82
PDPN-212ENST00000621990 C2CD2Q9Y426 696 aa9.91□□□□□ -0.82
PDPN-212ENST00000621990 RALGAPA2Q2PPJ7 1873 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 RBM47A0AV96 593 aaKnown RBP9.9□□□□□ -0.82
PDPN-212ENST00000621990 APOC4-APOC2K7ER74 178 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 CST8O60676 142 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 APOC2P02655 101 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 LGALS2P05162 132 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 VDRP11473 427 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 P4HA1P13674 534 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 INSRRP14616 1297 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 GDF10P55107 478 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 HIF1AQ16665 826 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 TAPT1Q6NXT6 567 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 CYP4V2Q6ZWL3 525 aaPredicted RBP9.9□□□□□ -0.82
PDPN-212ENST00000621990 TTC39CQ8N584 583 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 PPTC7Q8NI37 304 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 CPT1BQ92523 772 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 HAUS1Q96CS2 278 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 CDCA5Q96FF9 252 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 ZNF668Q96K58 619 aaPredicted RBP9.9□□□□□ -0.82
PDPN-212ENST00000621990 DHRS4Q9BTZ2 278 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 ZWILCHQ9H900 591 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 SSU72Q9NP77 194 aaKnown RBP9.9□□□□□ -0.82
PDPN-212ENST00000621990 NKIRAS1Q9NYS0 192 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 ITGA11Q9UKX5 1188 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 PLXNB2O15031 1838 aa9.9□□□□□ -0.82
PDPN-212ENST00000621990 SUN1O94901 812 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 ASMTLO95671 621 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 TRUB2O95900 331 aaKnown RBP9.9□□□□□ -0.83
PDPN-212ENST00000621990 MIPP30301 263 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 CTCFP49711 727 aaPredicted RBP9.9□□□□□ -0.83
PDPN-212ENST00000621990 ZNF143P52747 638 aaPredicted RBP9.9□□□□□ -0.83
PDPN-212ENST00000621990 WDR4P57081 412 aaKnown RBP9.9□□□□□ -0.83
PDPN-212ENST00000621990 GPX6P59796 221 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 SMTNL2Q2TAL5 461 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 EFHC2Q5JST6 749 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 KCNT1Q5JUK3 1230 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 SWT1Q5T5J6 900 aaKnown RBP9.9□□□□□ -0.83
PDPN-212ENST00000621990 NUGGCQ68CJ6 796 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 CGB2Q6NT52 195 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 CYB5D1Q6P9G0 228 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 ILDR2Q71H61 639 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 ARMCX2Q7L311 632 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 NT5DC4Q86YG4 428 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 GBP7Q8N8V2 638 aaPredicted RBP9.9□□□□□ -0.83
PDPN-212ENST00000621990 ANKRD42Q8N9B4 389 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 GRAMD1AQ96CP6 724 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 TGS1Q96RS0 853 aaKnown RBP9.9□□□□□ -0.83
PDPN-212ENST00000621990 SAE1Q9UBE0 346 aaPredicted RBP9.9□□□□□ -0.83
PDPN-212ENST00000621990 KIAA1257Q9ULG3 409 aa9.9□□□□□ -0.83
PDPN-212ENST00000621990 BARX2Q9UMQ3 279 aaPredicted RBP9.9□□□□□ -0.83
PDPN-212ENST00000621990 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.9□□□□□ -0.83
PDPN-212ENST00000621990 CITO14578 2027 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 CLUHO75153 1309 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 A0A087WZ62 844 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 CD48P09326 243 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 TSHRP16473 764 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 ARF4P18085 180 aaPredicted RBP9.89□□□□□ -0.83
PDPN-212ENST00000621990 TAC1P20366 129 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 STX2P32856 288 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 ACVR2BQ13705 512 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 TMED2Q15363 201 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 MTFR1Q15390 333 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 ZNF792Q3KQV3 632 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 LCLAT1Q6UWP7 414 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 MOB2Q70IA6 237 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 SPATA21Q7Z572 469 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 ZBED8Q8IZ13 594 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 EMC1Q8N766 993 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 OPTNQ96CV9 577 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 HPDLQ96IR7 371 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 FDXACB1Q9BRP7 624 aaPredicted RBP9.89□□□□□ -0.83
PDPN-212ENST00000621990 WDR83Q9BRX9 315 aaKnown RBP9.89□□□□□ -0.83
PDPN-212ENST00000621990 ABCF3Q9NUQ8 709 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 HAUS2Q9NVX0 235 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 USP18Q9UMW8 372 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 SMG5Q9UPR3 1016 aaKnown RBP9.89□□□□□ -0.83
PDPN-212ENST00000621990 ARL2BPQ9Y2Y0 163 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.89□□□□□ -0.83
PDPN-212ENST00000621990 M0QYV0 167 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 FOXN2P32314 431 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 RPL22P35268 128 aaKnown RBP9.89□□□□□ -0.83
PDPN-212ENST00000621990 IL9RQ01113 521 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 PLCB3Q01970 1234 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 PDIA2Q13087 525 aaKnown RBP9.89□□□□□ -0.83
PDPN-212ENST00000621990 ORC1Q13415 861 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 TMEM132DQ14C87 1099 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 MAP1SQ66K74 1059 aaPredicted RBP9.89□□□□□ -0.83
PDPN-212ENST00000621990 TMEM130Q8N3G9 435 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 GDAP1Q8TB36 358 aa9.89□□□□□ -0.83
PDPN-212ENST00000621990 GTF3C2Q8WUA4 911 aaPredicted RBP9.89□□□□□ -0.83
PDPN-212ENST00000621990 C16orf70Q9BSU1 422 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms