RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ZFHX2Q9C0A1 2572 aaPredicted RBP5.59□□□□□ -1.51
SHMT1-211ENST00000618902 CCDC66A2RUB6 948 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 MYBPHLA2RUH7 354 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 KCNJ18B7U540 433 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 PMM2O15305 246 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 PHACTR2O75167 634 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 SOAT2O75908 522 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 GNA14O95837 355 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 CALCAP01258 141 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 AFPP02771 609 aaKnown RBP5.59□□□□□ -1.51
SHMT1-211ENST00000618902 PDGFRBP09619 1106 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 WEE2P0C1S8 567 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 CHRM1P11229 460 aaPredicted RBP5.59□□□□□ -1.51
SHMT1-211ENST00000618902 P4HA1P13674 534 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 GLULP15104 373 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 IL9P15248 144 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 SLC9A1P19634 815 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 ACO1P21399 889 aaKnown RBP5.59□□□□□ -1.51
SHMT1-211ENST00000618902 WARSP23381 471 aaKnown RBP5.59□□□□□ -1.51
SHMT1-211ENST00000618902 MCM3P25205 808 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 PCSK1P29120 753 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 CA8P35219 290 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 PIK3CAP42336 1068 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 MAGEA9P43362 315 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 LHX1P48742 406 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 CACNA2D1P54289 1103 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 ARPP19P56211 112 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 PSMC1P62191 440 aaKnown RBP5.59□□□□□ -1.51
SHMT1-211ENST00000618902 NOP14P78316 857 aaKnown RBP5.59□□□□□ -1.51
SHMT1-211ENST00000618902 MYL7Q01449 175 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 PFKPQ01813 784 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 KCNMA1Q12791 1236 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 LRMPQ12912 555 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 GPS2Q13227 327 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 GPR17Q13304 367 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 TRPC3Q13507 836 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 KCNJ12Q14500 433 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 CLUL1Q15846 466 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 SGSM1Q2NKQ1 1148 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 WDR72Q3MJ13 1102 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 CTXN3Q4LDR2 81 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 TCP11X2Q5H9J9 407 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 PPM1LQ5SGD2 360 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 E4F1Q66K89 784 aaPredicted RBP5.59□□□□□ -1.51
SHMT1-211ENST00000618902 KRT39Q6A163 491 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 IQCEQ6IPM2 695 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 GJB7Q6PEY0 223 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 RNF19BQ6ZMZ0 732 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 PAQR9Q6ZVX9 377 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 ITIH5Q86UX2 942 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 RNF135Q8IUD6 432 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 ARHGEF19Q8IW93 802 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 DCP1BQ8IZD4 617 aaKnown RBP5.59□□□□□ -1.51
SHMT1-211ENST00000618902 ADGRF2Q8IZF7 708 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 TOP6BLQ8N6T0 577 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 GPR161Q8N6U8 529 aaKnown RBP5.59□□□□□ -1.51
SHMT1-211ENST00000618902 ATAD1Q8NBU5 361 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 EHBP1Q8NDI1 1231 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 FBXL13Q8NEE6 735 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 SPPL2BQ8TCT7 592 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 TAF4BQ92750 862 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 MSANTD3Q96H12 275 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 FUBP3Q96I24 572 aaKnown RBP eCLIP5.59□□□□□ -1.51
SHMT1-211ENST00000618902 SHDQ96IW2 340 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 KREMEN1Q96MU8 473 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 ACBD6Q9BR61 282 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 CRACR2AQ9BSW2 395 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 IER2Q9BTL4 223 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 APOL5Q9BWW9 433 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 BCO2Q9BYV7 579 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 ELOVL4Q9GZR5 314 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 INTS2Q9H0H0 1204 aaKnown RBP5.59□□□□□ -1.51
SHMT1-211ENST00000618902 ZCWPW1Q9H0M4 648 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 METTL14Q9HCE5 456 aaKnown RBP5.59□□□□□ -1.51
SHMT1-211ENST00000618902 TRPV5Q9NQA5 729 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 RAB20Q9NX57 234 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 FAM53CQ9NYF3 392 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 WNT16Q9UBV4 365 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 DNAI1Q9UI46 699 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 TECTAO75443 2155 aa5.59□□□□□ -1.52
SHMT1-211ENST00000618902 ITIH6Q6UXX5 1313 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 MTMR11A4FU01 709 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 RNF225M0QZC1 329 aaPredicted RBP5.58□□□□□ -1.52
SHMT1-211ENST00000618902 EPHB6O15197 1021 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 TEX33O43247 280 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 HUS1O60921 280 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 TACC1O75410 805 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 LRG1P02750 347 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 C8AP07357 584 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 PTPN2P17706 415 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 DDX6P26196 483 aaKnown RBP eCLIP5.58□□□□□ -1.52
SHMT1-211ENST00000618902 PON1P27169 355 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 MTIF2P46199 727 aaKnown RBP5.58□□□□□ -1.52
SHMT1-211ENST00000618902 PPP3CCP48454 512 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 GPR15P49685 360 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 KLK7P49862 253 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 PDE6CP51160 858 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 CLCN5P51795 746 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 NDST1P52848 882 aa5.58□□□□□ -1.52
SHMT1-211ENST00000618902 COPB1P53618 953 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms