RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 PCDHGC5Q9Y5F6 944 aa18.47■□□□□ 0.55
DDX49-213ENST00000602113 TCRBV5S1A1TA0A578 114 aa18.46■□□□□ 0.55
DDX49-213ENST00000602113 LCHNA4D1U4 455 aa18.46■□□□□ 0.55
DDX49-213ENST00000602113 GRID2IPA4D2P6 1211 aa18.46■□□□□ 0.55
DDX49-213ENST00000602113 TBC1D4O60343 1298 aa18.46■□□□□ 0.55
DDX49-213ENST00000602113 MTA2O94776 668 aa18.46■□□□□ 0.55
DDX49-213ENST00000602113 GABRB2P47870 512 aa18.46■□□□□ 0.55
DDX49-213ENST00000602113 CACNA2D1P54289 1103 aa18.46■□□□□ 0.55
DDX49-213ENST00000602113 HADHBP55084 474 aaKnown RBP18.46■□□□□ 0.55
DDX49-213ENST00000602113 PLEKHA7Q6IQ23 1121 aa18.46■□□□□ 0.55
DDX49-213ENST00000602113 RSPO2Q6UXX9 243 aaPredicted RBP18.46■□□□□ 0.55
DDX49-213ENST00000602113 STK32AQ8WU08 396 aa18.46■□□□□ 0.55
DDX49-213ENST00000602113 MTIF3Q9H2K0 278 aaKnown RBP18.46■□□□□ 0.55
DDX49-213ENST00000602113 CHST7Q9NS84 486 aa18.46■□□□□ 0.55
DDX49-213ENST00000602113 TLL1O43897 1013 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 PALMO75781 387 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 GJB6O95452 261 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 TUBB4AP04350 444 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 NPR3P17342 541 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 MAMLD1Q13495 774 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 USP41Q3LFD5 358 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 SLC39A12Q504Y0 691 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 ZNF280DQ6N043 979 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 PRSS55Q6UWB4 352 aaPredicted RBP18.45■□□□□ 0.54
DDX49-213ENST00000602113 CLEC20AQ6ZU45 233 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 XYLT1Q86Y38 959 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 LRRC57Q8N9N7 239 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 CLP1Q92989 425 aaKnown RBP18.45■□□□□ 0.54
DDX49-213ENST00000602113 C18orf8Q96DM3 657 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 TMEM169Q96HH4 297 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 SMOQ99835 787 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 ST7Q9NRC1 585 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 UVRAGQ9P2Y5 699 aa18.45■□□□□ 0.54
DDX49-213ENST00000602113 OR6C75A6NL08 312 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 E5RJQ4 531 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 PIK3R2O00459 728 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 XPO1O14980 1071 aaKnown RBP18.44■□□□□ 0.54
DDX49-213ENST00000602113 AP1G2O75843 785 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 SOD2P04179 222 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 FAM200BP0CF97 657 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 PLA2G4AP47712 749 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 RPL34P49207 117 aaKnown RBP18.44■□□□□ 0.54
DDX49-213ENST00000602113 MAPRE1Q15691 268 aaKnown RBP18.44■□□□□ 0.54
DDX49-213ENST00000602113 ANKS3Q6ZW76 656 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 TMEM110Q86TL2 294 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 ZMIZ2Q8NF64 920 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 TRIM58Q8NG06 486 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 ZNF564Q8TBZ8 553 aaPredicted RBP18.44■□□□□ 0.54
DDX49-213ENST00000602113 ZNF592Q92610 1267 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 TRIM7Q9C029 511 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 GOLPH3Q9H4A6 298 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 SYNCQ9H7C4 482 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 STRIP2Q9ULQ0 834 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 KIAA1671Q9BY89 1806 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 CARNS1A5YM72 827 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 H7C4K7 107 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 BUB1BO60566 1050 aaPredicted RBP18.44■□□□□ 0.54
DDX49-213ENST00000602113 BDNFP23560 247 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 RABGGTBP53611 331 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 MAP3K7CLP57077 242 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 SHHQ15465 462 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 IFI16Q16666 785 aaKnown RBP18.44■□□□□ 0.54
DDX49-213ENST00000602113 DNTTIP2Q5QJE6 756 aaKnown RBP18.44■□□□□ 0.54
DDX49-213ENST00000602113 DDX53Q86TM3 631 aaKnown RBP18.44■□□□□ 0.54
DDX49-213ENST00000602113 PIGZQ86VD9 579 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 DCP1BQ8IZD4 617 aaKnown RBP18.44■□□□□ 0.54
DDX49-213ENST00000602113 MSANTD4Q8NCY6 345 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 RIN2Q8WYP3 895 aaPredicted RBP18.44■□□□□ 0.54
DDX49-213ENST00000602113 SMARCD1Q96GM5 515 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 HERC2P3Q9BVR0 1158 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 AAASQ9NRG9 546 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 PARVAQ9NVD7 372 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 PCDHB12Q9Y5F1 795 aa18.44■□□□□ 0.54
DDX49-213ENST00000602113 PPM1AP35813 382 aa18.43■□□□□ 0.54
DDX49-213ENST00000602113 GSCP56915 257 aaPredicted RBP18.43■□□□□ 0.54
DDX49-213ENST00000602113 ZNF268Q14587 947 aaPredicted RBP18.43■□□□□ 0.54
DDX49-213ENST00000602113 PPP1R15BQ5SWA1 713 aa18.43■□□□□ 0.54
DDX49-213ENST00000602113 FAM109BQ6ICB4 259 aaPredicted RBP18.43■□□□□ 0.54
DDX49-213ENST00000602113 DNAJC24Q6P3W2 148 aa18.43■□□□□ 0.54
DDX49-213ENST00000602113 C3orf20Q8ND61 904 aa18.43■□□□□ 0.54
DDX49-213ENST00000602113 IPO4Q8TEX9 1081 aaKnown RBP18.43■□□□□ 0.54
DDX49-213ENST00000602113 PIK3R5Q8WYR1 880 aa18.43■□□□□ 0.54
DDX49-213ENST00000602113 MCRS1Q96EZ8 462 aa18.43■□□□□ 0.54
DDX49-213ENST00000602113 BTBD6Q96KE9 485 aa18.43■□□□□ 0.54
DDX49-213ENST00000602113 ALS2CR12Q96Q35 445 aa18.43■□□□□ 0.54
DDX49-213ENST00000602113 KCNK16Q96T55 309 aa18.43■□□□□ 0.54
DDX49-213ENST00000602113 CSNK1G1Q9HCP0 422 aa18.43■□□□□ 0.54
DDX49-213ENST00000602113 MTRRQ9UBK8 725 aa18.43■□□□□ 0.54
DDX49-213ENST00000602113 GRXCR1A8MXD5 290 aa18.42■□□□□ 0.54
DDX49-213ENST00000602113 GOLGA8SH3BPF8 625 aa18.42■□□□□ 0.54
DDX49-213ENST00000602113 ADAM12O43184 909 aa18.42■□□□□ 0.54
DDX49-213ENST00000602113 FGF18O76093 207 aa18.42■□□□□ 0.54
DDX49-213ENST00000602113 CASQ1P31415 396 aa18.42■□□□□ 0.54
DDX49-213ENST00000602113 SLC8A3P57103 927 aa18.42■□□□□ 0.54
DDX49-213ENST00000602113 C4orf50Q6ZRC1 276 aa18.42■□□□□ 0.54
DDX49-213ENST00000602113 FAM183BPQ6ZVS7 135 aa18.42■□□□□ 0.54
DDX49-213ENST00000602113 SLFN11Q7Z7L1 901 aa18.42■□□□□ 0.54
DDX49-213ENST00000602113 SPATA2LQ8IUW3 424 aaPredicted RBP18.42■□□□□ 0.54
DDX49-213ENST00000602113 HSFY1Q96LI6 401 aa18.42■□□□□ 0.54
DDX49-213ENST00000602113 RNPC3Q96LT9 517 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms