RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 SDHAF4Q5VUM1 108 aa15.06■□□□□ 0
LIG1-218ENST00000599322 SCARA3Q6AZY7 606 aa15.06■□□□□ 0
LIG1-218ENST00000599322 ISM2Q6H9L7 571 aa15.06■□□□□ 0
LIG1-218ENST00000599322 CC2D1AQ6P1N0 951 aaPredicted RBP15.06■□□□□ 0
LIG1-218ENST00000599322 DENND5BQ6ZUT9 1274 aa15.06■□□□□ 0
LIG1-218ENST00000599322 UNC93AQ86WB7 457 aa15.06■□□□□ 0
LIG1-218ENST00000599322 ADSSL1Q8N142 457 aa15.06■□□□□ 0
LIG1-218ENST00000599322 CELF5Q8N6W0 485 aaKnown RBP15.06■□□□□ 0
LIG1-218ENST00000599322 SPATA20Q8TB22 786 aa15.06■□□□□ 0
LIG1-218ENST00000599322 TRMT2BQ96GJ1 504 aaKnown RBP15.06■□□□□ 0
LIG1-218ENST00000599322 PCED1BQ96HM7 432 aa15.06■□□□□ 0
LIG1-218ENST00000599322 PKMYT1Q99640 499 aa15.06■□□□□ 0
LIG1-218ENST00000599322 BCO2Q9BYV7 579 aa15.06■□□□□ 0
LIG1-218ENST00000599322 PLA2G2FQ9BZM2 168 aa15.06■□□□□ 0
LIG1-218ENST00000599322 GZF1Q9H116 711 aaPredicted RBP15.06■□□□□ 0
LIG1-218ENST00000599322 KIF9Q9HAQ2 790 aa15.06■□□□□ 0
LIG1-218ENST00000599322 CYP3A43Q9HB55 503 aa15.06■□□□□ 0
LIG1-218ENST00000599322 CRTAC1Q9NQ79 661 aa15.06■□□□□ 0
LIG1-218ENST00000599322 TRPM5Q9NZQ8 1165 aa15.06■□□□□ 0
LIG1-218ENST00000599322 ARMCX3Q9UH62 379 aaPredicted RBP15.06■□□□□ 0
LIG1-218ENST00000599322 TSC2P49815 1807 aa15.06■□□□□ 0
LIG1-218ENST00000599322 TRAV19A0A0A6YYK7 116 aa15.05■□□□□ -0
LIG1-218ENST00000599322 KANSL1LA0AUZ9 987 aa15.05■□□□□ -0
LIG1-218ENST00000599322 CHADO15335 359 aa15.05■□□□□ -0
LIG1-218ENST00000599322 ASS1P00966 412 aaKnown RBP15.05■□□□□ -0
LIG1-218ENST00000599322 TRIM49P0CI25 452 aa15.05■□□□□ -0
LIG1-218ENST00000599322 TRIM49CP0CI26 452 aa15.05■□□□□ -0
LIG1-218ENST00000599322 GLULP15104 373 aa15.05■□□□□ -0
LIG1-218ENST00000599322 NPR3P17342 541 aa15.05■□□□□ -0
LIG1-218ENST00000599322 FCARP24071 287 aa15.05■□□□□ -0
LIG1-218ENST00000599322 MXI1P50539 228 aa15.05■□□□□ -0
LIG1-218ENST00000599322 KPNA1P52294 538 aaPredicted RBP15.05■□□□□ -0
LIG1-218ENST00000599322 CDH8P55286 799 aa15.05■□□□□ -0
LIG1-218ENST00000599322 CCDC40Q4G0X9 1142 aa15.05■□□□□ -0
LIG1-218ENST00000599322 ZCWPW2Q504Y3 356 aa15.05■□□□□ -0
LIG1-218ENST00000599322 DCAF17Q5H9S7 520 aaPredicted RBP15.05■□□□□ -0
LIG1-218ENST00000599322 VITQ6UXI7 678 aa15.05■□□□□ -0
LIG1-218ENST00000599322 TPRG1Q6ZUI0 275 aa15.05■□□□□ -0
LIG1-218ENST00000599322 CMTM8Q8IZV2 173 aa15.05■□□□□ -0
LIG1-218ENST00000599322 MAB21L3Q8N8X9 362 aa15.05■□□□□ -0
LIG1-218ENST00000599322 BPIFB1Q8TDL5 484 aa15.05■□□□□ -0
LIG1-218ENST00000599322 ERCC4Q92889 916 aaPredicted RBP15.05■□□□□ -0
LIG1-218ENST00000599322 EXOC4Q96A65 974 aa15.05■□□□□ -0
LIG1-218ENST00000599322 MSANTD3Q96H12 275 aa15.05■□□□□ -0
LIG1-218ENST00000599322 C8orf48Q96LL4 319 aa15.05■□□□□ -0
LIG1-218ENST00000599322 MYRFLQ96LU7 910 aa15.05■□□□□ -0
LIG1-218ENST00000599322 SLITRK1Q96PX8 696 aa15.05■□□□□ -0
LIG1-218ENST00000599322 OSBPL6Q9BZF3 934 aa15.05■□□□□ -0
LIG1-218ENST00000599322 SMYD3Q9H7B4 428 aa15.05■□□□□ -0
LIG1-218ENST00000599322 TRPC7Q9HCX4 862 aa15.05■□□□□ -0
LIG1-218ENST00000599322 TRPV5Q9NQA5 729 aa15.05■□□□□ -0
LIG1-218ENST00000599322 MAN1B1Q9UKM7 699 aa15.05■□□□□ -0
LIG1-218ENST00000599322 FANCMQ8IYD8 2048 aa15.05■□□□□ -0
LIG1-218ENST00000599322 NOTCH4Q99466 2003 aa15.05■□□□□ -0
LIG1-218ENST00000599322 MIA3Q5JRA6 1907 aa15.04■□□□□ -0
LIG1-218ENST00000599322 HCRTO43612 131 aa15.04■□□□□ -0
LIG1-218ENST00000599322 PI15O43692 258 aa15.04■□□□□ -0
LIG1-218ENST00000599322 GADD45BO75293 160 aaPredicted RBP15.04■□□□□ -0
LIG1-218ENST00000599322 RTN3O95197 1032 aaPredicted RBP15.04■□□□□ -0
LIG1-218ENST00000599322 VNN1O95497 513 aa15.04■□□□□ -0
LIG1-218ENST00000599322 F11P03951 625 aa15.04■□□□□ -0
LIG1-218ENST00000599322 CKMP06732 381 aa15.04■□□□□ -0
LIG1-218ENST00000599322 USP17L7P0C7H9 530 aa15.04■□□□□ -0
LIG1-218ENST00000599322 HMGA1P17096 107 aaKnown RBP15.04■□□□□ -0
LIG1-218ENST00000599322 MAGEA9P43362 315 aa15.04■□□□□ -0
LIG1-218ENST00000599322 GPR15P49685 360 aa15.04■□□□□ -0
LIG1-218ENST00000599322 NOP14P78316 857 aaKnown RBP15.04■□□□□ -0
LIG1-218ENST00000599322 AMPD2Q01433 879 aa15.04■□□□□ -0
LIG1-218ENST00000599322 ANKRD40Q6AI12 368 aa15.04■□□□□ -0
LIG1-218ENST00000599322 KLHL10Q6JEL2 608 aa15.04■□□□□ -0
LIG1-218ENST00000599322 ASCL5Q7RTU5 278 aa15.04■□□□□ -0
LIG1-218ENST00000599322 MON1AQ86VX9 555 aa15.04■□□□□ -0
LIG1-218ENST00000599322 TRIML1Q8N9V2 468 aa15.04■□□□□ -0
LIG1-218ENST00000599322 DTWD2Q8NBA8 298 aa15.04■□□□□ -0
LIG1-218ENST00000599322 FBXL13Q8NEE6 735 aa15.04■□□□□ -0
LIG1-218ENST00000599322 FAXDC2Q96IV6 333 aa15.04■□□□□ -0
LIG1-218ENST00000599322 CEP63Q96MT8 703 aa15.04■□□□□ -0
LIG1-218ENST00000599322 NIF3L1Q9GZT8 377 aa15.04■□□□□ -0
LIG1-218ENST00000599322 C8orf33Q9H7E9 229 aaPredicted RBP15.04■□□□□ -0
LIG1-218ENST00000599322 IL21Q9HBE4 155 aa15.04■□□□□ -0
LIG1-218ENST00000599322 FAM170BA6NMN3 283 aa15.03■□□□□ -0
LIG1-218ENST00000599322 F8VP50 259 aa15.03■□□□□ -0
LIG1-218ENST00000599322 BIN1O00499 593 aa15.03■□□□□ -0
LIG1-218ENST00000599322 GNA14O95837 355 aa15.03■□□□□ -0
LIG1-218ENST00000599322 ABL1P00519 1130 aa15.03■□□□□ -0
LIG1-218ENST00000599322 PFKLP17858 780 aa15.03■□□□□ -0
LIG1-218ENST00000599322 NBL1P41271 181 aa15.03■□□□□ -0
LIG1-218ENST00000599322 RAP1GAPP47736 663 aa15.03■□□□□ -0
LIG1-218ENST00000599322 NDST1P52848 882 aa15.03■□□□□ -0
LIG1-218ENST00000599322 YWHAEP62258 255 aaKnown RBP15.03■□□□□ -0
LIG1-218ENST00000599322 PPP3CAQ08209 521 aa15.03■□□□□ -0
LIG1-218ENST00000599322 STXBP5Q5T5C0 1151 aa15.03■□□□□ -0
LIG1-218ENST00000599322 FILIP1Q7Z7B0 1213 aa15.03■□□□□ -0
LIG1-218ENST00000599322 ACOT1Q86TX2 421 aa15.03■□□□□ -0
LIG1-218ENST00000599322 CCDC105Q8IYK2 499 aa15.03■□□□□ -0
LIG1-218ENST00000599322 STKLD1Q8NE28 680 aa15.03■□□□□ -0
LIG1-218ENST00000599322 PDZD8Q8NEN9 1154 aa15.03■□□□□ -0
LIG1-218ENST00000599322 PJA1Q8NG27 643 aa15.03■□□□□ -0
LIG1-218ENST00000599322 TAS1R2Q8TE23 839 aa15.03■□□□□ -0
LIG1-218ENST00000599322 EEF2KMTQ96G04 330 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms