RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ATXN3LQ9H3M9 355 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 WNT16Q9UBV4 365 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 ARMCX3Q9UH62 379 aaPredicted RBP11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 COQ4Q9Y3A0 265 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 F8VP50 259 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 STX10O60499 249 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 PRAMEF12O95522 483 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 FGF19O95750 216 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 CSH1P0DML2 217 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 CSH2P0DML3 217 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 P4HA1P13674 534 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 CDC25CP30307 473 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 USP46P62068 366 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 GPR158Q5T848 1215 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 TCERG1LQ5VWI1 586 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 CWF19L1Q69YN2 538 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 FRMD5Q7Z6J6 570 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 ACOT1Q86TX2 421 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 FAM35AQ86V20 835 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 GPIHBP1Q8IV16 184 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 FUKQ8N0W3 1084 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 SIX5Q8N196 739 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 CRYBG2Q8N1P7 616 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 FBXL13Q8NEE6 735 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 GPT2Q8TD30 523 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 SPATA17Q96L03 361 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 LRRC3BQ96PB8 259 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 ARID3AQ99856 593 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 SLITRK6Q9H5Y7 841 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 ZFP14Q9HCL3 533 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 RAB20Q9NX57 234 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 CA14Q9ULX7 337 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 MAGED2Q9UNF1 606 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 MYOFQ9NZM1 2061 aa11.7□□□□□ -0.54
SHKBP1-206ENST00000595523 BICDL2A1A5D9 508 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 CILPO75339 1184 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 CCDC130P13994 396 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 GRIK1P39086 918 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 MARSP56192 900 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 GRM2Q14416 872 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 TAF12Q16514 161 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 UNC93AQ86WB7 457 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 ARID3BQ8IVW6 561 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 TRIM59Q8IWR1 403 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 C12orf29Q8N999 325 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 TATDN2Q93075 761 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 C8orf48Q96LL4 319 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 SLC46A2Q9BY10 475 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 IMPG2Q9BZV3 1241 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 GPR88Q9GZN0 384 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 ELOVL4Q9GZR5 314 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 SMG9Q9H0W8 520 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 NUP62CLQ9H1M0 184 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 TASP1Q9H6P5 420 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 CYP3A43Q9HB55 503 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 METTL14Q9HCE5 456 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 FBXL21Q9UKT6 434 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 PIEZO1Q92508 2521 aa11.69□□□□□ -0.54
SHKBP1-206ENST00000595523 SHISA7A6NL88 538 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 HEPACAM2A8MVW5 462 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 ARNTLO00327 626 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 TRIM66O15016 1216 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 BEST1O76090 585 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 CD58P19256 250 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 WEE1P30291 646 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 FMO5P49326 533 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 DPCR1Q3MIW9 517 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 CCDC40Q4G0X9 1142 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 ARHGAP15Q53QZ3 475 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 TXNDC8Q6A555 127 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 IRF2BP1Q8IU81 584 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 TMEM105Q8N8V8 129 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 ZMIZ2Q8NF64 920 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 LMO3Q8TAP4 145 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 RIN3Q8TB24 985 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 SLC2A14Q8TDB8 520 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 TNIP3Q96KP6 325 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 CEP295NLQ96MC4 621 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 GBP4Q96PP9 640 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 KCNK16Q96T55 309 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 TTLL2Q9BWV7 592 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 SRRTQ9BXP5 876 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 ARHGEF3Q9NR81 526 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 FAM49BQ9NUQ9 324 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 RWDD2AQ9UIY3 292 aa11.68□□□□□ -0.54
SHKBP1-206ENST00000595523 ATG2BQ96BY7 2078 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 FANCMQ8IYD8 2048 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 USP34Q70CQ2 3546 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 TNFRSF10BO14763 440 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 PMM2O15305 246 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 PI15O43692 258 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 PSMC3P17980 439 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 ANXA13P27216 316 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 AVPR2P30518 371 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 FCHO2Q0JRZ9 810 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 DENND5BQ6ZUT9 1274 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 MON1AQ86VX9 555 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 MFSD6LQ8IWD5 586 aa11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 SUGP1Q8IWZ8 645 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-206ENST00000595523 CMTM8Q8IZV2 173 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms