RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 MAMSTRQ6ZN01 415 aa19.06■□□□□ 0.64
ERBB2-221ENST00000584888 INTS8Q75QN2 995 aaKnown RBP19.06■□□□□ 0.64
ERBB2-221ENST00000584888 ZBTB44Q8NCP5 570 aa19.06■□□□□ 0.64
ERBB2-221ENST00000584888 RUBCNQ92622 972 aa19.06■□□□□ 0.64
ERBB2-221ENST00000584888 FUBP3Q96I24 572 aaKnown RBP eCLIP19.06■□□□□ 0.64
ERBB2-221ENST00000584888 MMS19Q96T76 1030 aa19.06■□□□□ 0.64
ERBB2-221ENST00000584888 HINFPQ9BQA5 517 aa19.06■□□□□ 0.64
ERBB2-221ENST00000584888 PI4K2AQ9BTU6 479 aa19.06■□□□□ 0.64
ERBB2-221ENST00000584888 HOOK1Q9UJC3 728 aaKnown RBP19.06■□□□□ 0.64
ERBB2-221ENST00000584888 OTOGLQ3ZCN5 2332 aa19.06■□□□□ 0.64
ERBB2-221ENST00000584888 TICRRQ7Z2Z1 1910 aa19.06■□□□□ 0.64
ERBB2-221ENST00000584888 COL4A2P08572 1712 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 GPR179Q6PRD1 2367 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 SLC38A8A6NNN8 435 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 PHACTR2O75167 634 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 CHRNB1P11230 501 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 HMGA1P17096 107 aaKnown RBP19.05■□□□□ 0.64
ERBB2-221ENST00000584888 CYP2F1P24903 491 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 WEE1P30291 646 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 CDC25CP30307 473 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 PSMC2P35998 433 aaKnown RBP19.05■□□□□ 0.64
ERBB2-221ENST00000584888 GNL1P36915 607 aaPredicted RBP19.05■□□□□ 0.64
ERBB2-221ENST00000584888 ID4P47928 161 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 KPNA1P52294 538 aaPredicted RBP19.05■□□□□ 0.64
ERBB2-221ENST00000584888 CYP4F8P98187 520 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 BIRC3Q13489 604 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 FAM186BQ8IYM0 893 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 KIAA2013Q8IYS2 634 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 DCLK2Q8N568 766 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 ZFYVE19Q96K21 471 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 GCNAQ96QF7 691 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 SYT15Q9BQS2 421 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 SLC46A2Q9BY10 475 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 C8orf33Q9H7E9 229 aaPredicted RBP19.05■□□□□ 0.64
ERBB2-221ENST00000584888 OBP2AQ9NY56 170 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 MAN1B1Q9UKM7 699 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 OBSL1O75147 1896 aa19.05■□□□□ 0.64
ERBB2-221ENST00000584888 LILRB5O75023 590 aa19.04■□□□□ 0.64
ERBB2-221ENST00000584888 PRAMEF12O95522 483 aa19.04■□□□□ 0.64
ERBB2-221ENST00000584888 PDGFRBP09619 1106 aa19.04■□□□□ 0.64
ERBB2-221ENST00000584888 BMP6P22004 513 aa19.04■□□□□ 0.64
ERBB2-221ENST00000584888 MAGEA11P43364 429 aa19.04■□□□□ 0.64
ERBB2-221ENST00000584888 SOX9P48436 509 aa19.04■□□□□ 0.64
ERBB2-221ENST00000584888 GPR15P49685 360 aa19.04■□□□□ 0.64
ERBB2-221ENST00000584888 PMS1P54277 932 aaKnown RBP19.04■□□□□ 0.64
ERBB2-221ENST00000584888 PPP3CAQ08209 521 aa19.04■□□□□ 0.64
ERBB2-221ENST00000584888 ARHGAP29Q52LW3 1261 aa19.04■□□□□ 0.64
ERBB2-221ENST00000584888 ANKRD40Q6AI12 368 aa19.04■□□□□ 0.64
ERBB2-221ENST00000584888 C1orf228Q6PIY5 440 aa19.04■□□□□ 0.64
ERBB2-221ENST00000584888 MSANTD3Q96H12 275 aa19.04■□□□□ 0.64
ERBB2-221ENST00000584888 IER2Q9BTL4 223 aa19.04■□□□□ 0.64
ERBB2-221ENST00000584888 NUP210Q8TEM1 1887 aaPredicted RBP19.03■□□□□ 0.64
ERBB2-221ENST00000584888 ASS1P00966 412 aaKnown RBP19.03■□□□□ 0.64
ERBB2-221ENST00000584888 UBE2HP62256 183 aa19.03■□□□□ 0.64
ERBB2-221ENST00000584888 TNNC1P63316 161 aa19.03■□□□□ 0.64
ERBB2-221ENST00000584888 SGSM1Q2NKQ1 1148 aa19.03■□□□□ 0.64
ERBB2-221ENST00000584888 ZNF699Q32M78 642 aa19.03■□□□□ 0.64
ERBB2-221ENST00000584888 TMEM150AQ86TG1 271 aa19.03■□□□□ 0.64
ERBB2-221ENST00000584888 TTC8Q8TAM2 541 aa19.03■□□□□ 0.64
ERBB2-221ENST00000584888 MYCBPAPQ8TBZ2 947 aa19.03■□□□□ 0.64
ERBB2-221ENST00000584888 BPIFB1Q8TDL5 484 aa19.03■□□□□ 0.64
ERBB2-221ENST00000584888 TAF4BQ92750 862 aa19.03■□□□□ 0.64
ERBB2-221ENST00000584888 FAM126AQ9BYI3 521 aaPredicted RBP19.03■□□□□ 0.64
ERBB2-221ENST00000584888 SMG9Q9H0W8 520 aaKnown RBP19.03■□□□□ 0.64
ERBB2-221ENST00000584888 SDCBP2Q9H190 292 aa19.03■□□□□ 0.64
ERBB2-221ENST00000584888 GTSE1Q9NYZ3 720 aa19.03■□□□□ 0.64
ERBB2-221ENST00000584888 NXF1Q9UBU9 619 aaKnown RBP19.03■□□□□ 0.64
ERBB2-221ENST00000584888 ANAPC1Q9H1A4 1944 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 CETN3O15182 167 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 HLA-DRAP01903 254 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 F11P03951 625 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 TRIM49P0CI25 452 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 TRIM49CP0CI26 452 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 TDGF1P13385 188 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 CD44P16070 742 aaKnown RBP19.02■□□□□ 0.64
ERBB2-221ENST00000584888 ANP32AP39687 249 aaKnown RBP19.02■□□□□ 0.64
ERBB2-221ENST00000584888 CDH8P55286 799 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 NLRP12P59046 1061 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 PSMC1P62191 440 aaKnown RBP19.02■□□□□ 0.64
ERBB2-221ENST00000584888 RPL10AP62906 217 aaKnown RBP19.02■□□□□ 0.64
ERBB2-221ENST00000584888 MORC3Q14149 939 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 MAPRE1Q15691 268 aaKnown RBP19.02■□□□□ 0.64
ERBB2-221ENST00000584888 DDR2Q16832 855 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 ZNF667Q5HYK9 610 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 C4orf50Q6ZRC1 276 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 RALGPS2Q86X27 583 aaPredicted RBP19.02■□□□□ 0.64
ERBB2-221ENST00000584888 SPATA2LQ8IUW3 424 aaPredicted RBP19.02■□□□□ 0.64
ERBB2-221ENST00000584888 CMTM8Q8IZV2 173 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 OR6B3Q8NGW1 331 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 MYLPFQ96A32 169 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 ELMO3Q96BJ8 720 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 MYRFLQ96LU7 910 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 SNX25Q9H3E2 840 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 SMYD3Q9H7B4 428 aa19.02■□□□□ 0.64
ERBB2-221ENST00000584888 MAGEC2Q9UBF1 373 aaPredicted RBP19.02■□□□□ 0.64
ERBB2-221ENST00000584888 ZNF638Q14966 1978 aaKnown RBP19.02■□□□□ 0.64
ERBB2-221ENST00000584888 PPP1R3GB7ZBB8 358 aa19.01■□□□□ 0.63
ERBB2-221ENST00000584888 SPECC1L-ADORA2AF8WAN1 911 aa19.01■□□□□ 0.63
ERBB2-221ENST00000584888 NOL4O94818 638 aa19.01■□□□□ 0.63
ERBB2-221ENST00000584888 CSH1P0DML2 217 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms