RNA–Protein interactions for RNA: ENST00000578340.4

AC116003.1-201, humanhuman

TSL 3 BASIC

Gene AC116003.1, Length 536 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116003.1-201ENST00000578340 DPYSL4O14531 572 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 SMC2O95347 1197 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 KRT13P13646 458 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 GRIK1P39086 918 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 PIK3CAP42336 1068 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 CACNA2D1P54289 1103 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 FCHO2Q0JRZ9 810 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 SGSM1Q2NKQ1 1148 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 EDRF1Q3B7T1 1238 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 ISM2Q6H9L7 571 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 VSTM1Q6UX27 236 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 INTS8Q75QN2 995 aaKnown RBP17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 YAF2Q8IY57 180 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 CMTM8Q8IZV2 173 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 B3GALNT2Q8NCR0 500 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 TRMT2BQ96GJ1 504 aaKnown RBP17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 ZFYVE19Q96K21 471 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 MYRFLQ96LU7 910 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 B3GNT5Q9BYG0 378 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 ZNF518BQ9C0D4 1074 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 LTB4R2Q9NPC1 389 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 TMEM30AQ9NV96 361 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 CIZ1Q9ULV3 898 aaPredicted RBP17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 VPS13AQ96RL7 3174 aa17.15■□□□□ 0.34
AC116003.1-201ENST00000578340 PATJQ8NI35 1801 aa17.14■□□□□ 0.34
AC116003.1-201ENST00000578340 FAM170BA6NMN3 283 aa17.14■□□□□ 0.33
AC116003.1-201ENST00000578340 ASS1P00966 412 aaKnown RBP17.14■□□□□ 0.33
AC116003.1-201ENST00000578340 TARSP26639 723 aaKnown RBP17.14■□□□□ 0.33
AC116003.1-201ENST00000578340 WEE1P30291 646 aa17.14■□□□□ 0.33
AC116003.1-201ENST00000578340 PMS1P54277 932 aaKnown RBP17.14■□□□□ 0.33
AC116003.1-201ENST00000578340 USP46P62068 366 aa17.14■□□□□ 0.33
AC116003.1-201ENST00000578340 ANGPT1Q15389 498 aa17.14■□□□□ 0.33
AC116003.1-201ENST00000578340 TAS1R2Q8TE23 839 aa17.14■□□□□ 0.33
AC116003.1-201ENST00000578340 MRPS31Q92665 395 aaKnown RBP17.14■□□□□ 0.33
AC116003.1-201ENST00000578340 UXTQ9UBK9 157 aaPredicted RBP17.14■□□□□ 0.33
AC116003.1-201ENST00000578340 CCL26Q9Y258 94 aa17.14■□□□□ 0.33
AC116003.1-201ENST00000578340 HELZP42694 1942 aaKnown RBP17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 TRIM49BA6NDI0 452 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 F8VP50 259 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 CHADO15335 359 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 KINO60870 393 aaKnown RBP17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 ASPAP45381 313 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 MRE11P49959 708 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 ORC1Q13415 861 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 COBLL1Q53SF7 1204 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 ANKRD40Q6AI12 368 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 ZNF852Q6ZMS4 543 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 MON1AQ86VX9 555 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 TTC8Q8TAM2 541 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 BPIFB1Q8TDL5 484 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 TAF4BQ92750 862 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 USP13Q92995 863 aaPredicted RBP17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 SPATA17Q96L03 361 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 SLC22A12Q96S37 553 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 APOBEC3GQ9HC16 384 aaKnown RBP17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 TRPC7Q9HCX4 862 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 TRPV5Q9NQA5 729 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 OBP2AQ9NY56 170 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 HMGXB4Q9UGU5 601 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 HOOK1Q9UJC3 728 aaKnown RBP17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 MAN1B1Q9UKM7 699 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 PIAS3Q9Y6X2 628 aa17.13■□□□□ 0.33
AC116003.1-201ENST00000578340 TRIM66O15016 1216 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 CETN3O15182 167 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 P4HA1P13674 534 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 DDX6P26196 483 aaKnown RBP eCLIP17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 ANXA13P27216 316 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 AVPR1AP37288 418 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 SOX9P48436 509 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 NDST1P52848 882 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 DENND5BQ6ZUT9 1274 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 ACOT1Q86TX2 421 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 ADSSL1Q8N142 457 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 CELF5Q8N6W0 485 aaKnown RBP17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 RIN3Q8TB24 985 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 CYP2S1Q96SQ9 504 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 ELOVL4Q9GZR5 314 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 IRF2BPLQ9H1B7 796 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 GTSE1Q9NYZ3 720 aa17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 NDRG2Q9UN36 371 aaKnown RBP17.12■□□□□ 0.33
AC116003.1-201ENST00000578340 C2orf78A6NCI8 922 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 EPB41P11171 864 aaKnown RBP17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 CD44P16070 742 aaKnown RBP17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 MCCD1P59942 119 aaPredicted RBP17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 NOP14P78316 857 aaKnown RBP17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 ENPEPQ07075 957 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 TNK2Q07912 1038 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 FZD5Q13467 585 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 ARHGAP29Q52LW3 1261 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 PAQR9Q6ZVX9 377 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 ELOA2Q8IYF1 753 aaPredicted RBP17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 ZNF687Q8N1G0 1237 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 CSGALNACT1Q8TDX6 532 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 SEMA4DQ92854 862 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 TNIP3Q96KP6 325 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 C8orf48Q96LL4 319 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 TSG101Q99816 390 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 MED10Q9BTT4 135 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 BCO2Q9BYV7 579 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 OSBPL6Q9BZF3 934 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms