RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 FRMD5Q7Z6J6 570 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 SUGP1Q8IWZ8 645 aaKnown RBP12.17□□□□□ -0.46
YBX3-216ENST00000544622 FBXL13Q8NEE6 735 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 FAM200AQ8TCP9 573 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 WHAMMQ8TF30 809 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 DEPDC1BQ8WUY9 529 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 E2F7Q96AV8 911 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 TNIP3Q96KP6 325 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 MED15Q96RN5 788 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 TTLL2Q9BWV7 592 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 CYP3A43Q9HB55 503 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 OBP2AQ9NY56 170 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 FBXL21Q9UKT6 434 aa12.17□□□□□ -0.46
YBX3-216ENST00000544622 PTPRDP23468 1912 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 HEPACAM2A8MVW5 462 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 BIN1O00499 593 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 TNFRSF10BO14763 440 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 TRIM66O15016 1216 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 STX10O60499 249 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 DDX6P26196 483 aaKnown RBP eCLIP12.16□□□□□ -0.46
YBX3-216ENST00000544622 GRIK1P39086 918 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 PIK3CAP42336 1068 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 MXI1P50539 228 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 NDST1P52848 882 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 MARSP56192 900 aaKnown RBP12.16□□□□□ -0.46
YBX3-216ENST00000544622 USP46P62068 366 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 CYP4F8P98187 520 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 PFKPQ01813 784 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 GPR158Q5T848 1215 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 SCARA5Q6ZMJ2 495 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 DENND5BQ6ZUT9 1274 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 MON1AQ86VX9 555 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 FUKQ8N0W3 1084 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 NELFBQ8WX92 580 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 TWNKQ96RR1 684 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 TRMT61BQ9BVS5 477 aaKnown RBP12.16□□□□□ -0.46
YBX3-216ENST00000544622 ZNF518BQ9C0D4 1074 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 ELOVL4Q9GZR5 314 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 FAM124BQ9H5Z6 455 aaPredicted RBP12.16□□□□□ -0.46
YBX3-216ENST00000544622 METTL14Q9HCE5 456 aaKnown RBP12.16□□□□□ -0.46
YBX3-216ENST00000544622 CSNK1G1Q9HCP0 422 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 ARHGEF3Q9NR81 526 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 IL37Q9NZH6 218 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 DLGAP2Q9P1A6 1054 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 UXTQ9UBK9 157 aaPredicted RBP12.16□□□□□ -0.46
YBX3-216ENST00000544622 HMGXB4Q9UGU5 601 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 ARMCX3Q9UH62 379 aaPredicted RBP12.16□□□□□ -0.46
YBX3-216ENST00000544622 CA14Q9ULX7 337 aa12.16□□□□□ -0.46
YBX3-216ENST00000544622 KMT2EQ8IZD2 1858 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 BICDL2A1A5D9 508 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 FAM92AA1XBS5 289 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 F8VP50 259 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 CLDN5O00501 218 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 CILPO75339 1184 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 PRAMEF12O95522 483 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 MLLT6P55198 1093 aaPredicted RBP12.15□□□□□ -0.46
YBX3-216ENST00000544622 PRKCQQ04759 706 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 TCF15Q12870 199 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 PAK1Q13153 545 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 GRM2Q14416 872 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 TAF12Q16514 161 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 ARHGAP15Q53QZ3 475 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 TXNDC8Q6A555 127 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 ACOT1Q86TX2 421 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 SCN4BQ8IWT1 228 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 CMTM8Q8IZV2 173 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 ZNF687Q8N1G0 1237 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 C12orf29Q8N999 325 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 ZMIZ2Q8NF64 920 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 PRSS33Q8NF86 280 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 DNASE1L2Q92874 299 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 IRF7Q92985 503 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 TATDN2Q93075 761 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 IPO9Q96P70 1041 aaKnown RBP12.15□□□□□ -0.46
YBX3-216ENST00000544622 KCNK16Q96T55 309 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 PRRX2Q99811 253 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 IMPG2Q9BZV3 1241 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 NIF3L1Q9GZT8 377 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 CLSTN2Q9H4D0 955 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 SLITRK6Q9H5Y7 841 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 MMRN2Q9H8L6 949 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 GCNT4Q9P109 453 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 MAGED2Q9UNF1 606 aaPredicted RBP12.15□□□□□ -0.46
YBX3-216ENST00000544622 VPS13AQ96RL7 3174 aa12.15□□□□□ -0.46
YBX3-216ENST00000544622 GREB1Q4ZG55 1949 aa12.14□□□□□ -0.47
YBX3-216ENST00000544622 CHADO15335 359 aa12.14□□□□□ -0.47
YBX3-216ENST00000544622 BEST1O76090 585 aa12.14□□□□□ -0.47
YBX3-216ENST00000544622 FZD5Q13467 585 aa12.14□□□□□ -0.47
YBX3-216ENST00000544622 ZNF268Q14587 947 aaPredicted RBP12.14□□□□□ -0.47
YBX3-216ENST00000544622 MLF2Q15773 248 aaPredicted RBP12.14□□□□□ -0.47
YBX3-216ENST00000544622 DCAF17Q5H9S7 520 aaPredicted RBP12.14□□□□□ -0.47
YBX3-216ENST00000544622 KLHL10Q6JEL2 608 aa12.14□□□□□ -0.47
YBX3-216ENST00000544622 FAM35AQ86V20 835 aa12.14□□□□□ -0.47
YBX3-216ENST00000544622 TRIM59Q8IWR1 403 aa12.14□□□□□ -0.47
YBX3-216ENST00000544622 MAB21L3Q8N8X9 362 aa12.14□□□□□ -0.47
YBX3-216ENST00000544622 FLCNQ8NFG4 579 aa12.14□□□□□ -0.47
YBX3-216ENST00000544622 LMO3Q8TAP4 145 aa12.14□□□□□ -0.47
YBX3-216ENST00000544622 USP13Q92995 863 aaPredicted RBP12.14□□□□□ -0.47
YBX3-216ENST00000544622 SHDQ96IW2 340 aa12.14□□□□□ -0.47
YBX3-216ENST00000544622 GCNAQ96QF7 691 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms