RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 ZBTB48P10074 688 aaPredicted RBP10.63□□□□□ -0.71
TOP3A-208ENST00000542570 RARAP10276 462 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 RAG1P15918 1043 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 NOVP48745 357 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 LIG3P49916 1009 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 FKBP1BP68106 108 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 LGSNQ5TDP6 509 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 SLC39A4Q6P5W5 647 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 RNF135Q8IUD6 432 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 MDM1Q8TC05 714 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 FAM136AQ96C01 138 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 TBC1D31Q96DN5 1066 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 TMEM169Q96HH4 297 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 RUNDC3BQ96NL0 473 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 ZIM3Q96PE6 472 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 ERP44Q9BS26 406 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 TMEM134Q9H6X4 195 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 IFT122Q9HBG6 1241 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 STK38LQ9Y2H1 464 aa10.63□□□□□ -0.71
TOP3A-208ENST00000542570 KCNK1O00180 336 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 MYBL2P10244 700 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 WEE1P30291 646 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 COILP38432 576 aaPredicted RBP10.62□□□□□ -0.71
TOP3A-208ENST00000542570 EFEMP1Q12805 493 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 TAF5Q15542 800 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 SLC9A9Q8IVB4 645 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 EFCAB13Q8IY85 973 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 OR6P1Q8NGX9 317 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 KLC2Q9H0B6 622 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 CARD9Q9H257 536 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 ASB7Q9H672 318 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 TJP2Q9UDY2 1190 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 USP18Q9UMW8 372 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 PPEF2O14830 753 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 PHF2O75151 1096 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 SPATA31D3P0C874 917 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 ERFP50548 548 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 MMRN1Q13201 1228 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 NUGGCQ68CJ6 796 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 SPATA31D4Q6ZUB0 917 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 TFAP2DQ7Z6R9 452 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 RCOR2Q8IZ40 523 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 SCLYQ96I15 445 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 PTPN18Q99952 460 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 TMEM39AQ9NV64 488 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 PADI3Q9ULW8 664 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 PROSCO94903 275 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 KYAT1Q16773 422 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 PPP1R26Q5T8A7 1209 aaPredicted RBP10.62□□□□□ -0.71
TOP3A-208ENST00000542570 LRRC31Q6UY01 552 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 BBOF1Q8ND07 529 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 JOSD2Q8TAC2 188 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 ARHGEF2Q92974 986 aaKnown RBP10.62□□□□□ -0.71
TOP3A-208ENST00000542570 PIDD1Q9HB75 910 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 NEU2Q9Y3R4 380 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 TJP1Q07157 1748 aa10.62□□□□□ -0.71
TOP3A-208ENST00000542570 SMIM28A0A1B0GU29 152 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 CCDC195A0A1B0GUA6 201 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 SLC1A1P43005 524 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 ARL4CP56559 192 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 SLC10A6Q3KNW5 377 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 GLE1Q53GS7 698 aaKnown RBP10.61□□□□□ -0.71
TOP3A-208ENST00000542570 DEFB106AQ8N104 65 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 DEPDC1BQ8WUY9 529 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 ARL8AQ96BM9 186 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 B3GALT6Q96L58 329 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 VPS11Q9H270 941 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 IPPQ9Y573 584 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 TCRBV7S2A1N4TA0A589 114 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 FRMD3A2A2Y4 597 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 ASS1P00966 412 aaKnown RBP10.61□□□□□ -0.71
TOP3A-208ENST00000542570 ALDH2P05091 517 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 DARSP14868 501 aaKnown RBP10.61□□□□□ -0.71
TOP3A-208ENST00000542570 ICAM3P32942 547 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 YWHAHQ04917 246 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-208ENST00000542570 NXNQ6DKJ4 435 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 VPS52Q8N1B4 723 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 SLC25A41Q8N5S1 370 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 TFAP2BQ92481 460 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 SNF8Q96H20 258 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 MFSD14AQ96MC6 490 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 YME1L1Q96TA2 773 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 ELAC2Q9BQ52 826 aaKnown RBP10.61□□□□□ -0.71
TOP3A-208ENST00000542570 FSD1LQ9BXM9 530 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 NIFKQ9BYG3 293 aaKnown RBP10.61□□□□□ -0.71
TOP3A-208ENST00000542570 ATXN3LQ9H3M9 355 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 WDCPQ9H6R7 721 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 WDR35Q9P2L0 1181 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 HMGXB4Q9UGU5 601 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 NR2E1Q9Y466 385 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 TRPV2Q9Y5S1 764 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 ATP8B3O60423 1300 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 EEF2KO00418 725 aaKnown RBP10.61□□□□□ -0.71
TOP3A-208ENST00000542570 PMPCBO75439 489 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 C22orf31O95567 290 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 KITP10721 976 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 BRAFP15056 766 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 AMPD1P23109 780 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 MIPP30301 263 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 SEC24CP53992 1094 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms