RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 DENND4AQ7Z401 1863 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 ATP8B3O60423 1300 aa9.82□□□□□ -0.84
SNHG1-215ENST00000540904 TMEM221A6NGB7 291 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 M0R296 226 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 TRIM66O15016 1216 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 NARSO43776 548 aaKnown RBP9.81□□□□□ -0.84
SNHG1-215ENST00000540904 GPR37L1O60883 481 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 CILPO75339 1184 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 NOL4O94818 638 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 AFPP02771 609 aaKnown RBP9.81□□□□□ -0.84
SNHG1-215ENST00000540904 ERCC5P28715 1186 aaPredicted RBP9.81□□□□□ -0.84
SNHG1-215ENST00000540904 CACNA2D1P54289 1103 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 CYP4F8P98187 520 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 CUL2Q13617 745 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 ZNF394Q53GI3 561 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 CCDC183Q5T5S1 534 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 GPR158Q5T848 1215 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 TANGO2Q6ICL3 276 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 SASS6Q6UVJ0 657 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 FAM35AQ86V20 835 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 GPIHBP1Q8IV16 184 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 FUKQ8N0W3 1084 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 CRYBG2Q8N1P7 616 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 SLC2A14Q8TDB8 520 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 SLC39A7Q92504 469 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 SMARCD2Q92925 531 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 FAXDC2Q96IV6 333 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 SPATA17Q96L03 361 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 ASB16Q96NS5 453 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 GPR88Q9GZN0 384 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 IL21Q9HBE4 155 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 ZFP14Q9HCL3 533 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 KRT82Q9NSB4 513 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 CISHQ9NSE2 258 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 TMEM30AQ9NV96 361 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 UXTQ9UBK9 157 aaPredicted RBP9.81□□□□□ -0.84
SNHG1-215ENST00000540904 FBXL21Q9UKT6 434 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 DUSP12Q9UNI6 340 aa9.81□□□□□ -0.84
SNHG1-215ENST00000540904 PRR33A8MZF0 331 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 PMM2O15305 246 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 P4HA2O15460 535 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 ECI2O75521 394 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 AP1G2O75843 785 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 F11P03951 625 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 CFHP08603 1231 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 SRFP11831 508 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 FCARP24071 287 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 ADORA2BP29275 332 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 VIPR2P41587 438 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 MTIF2P46199 727 aaKnown RBP9.8□□□□□ -0.84
SNHG1-215ENST00000540904 HSP90AA4PQ58FG1 418 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 RBM43Q6ZSC3 357 aaKnown RBP9.8□□□□□ -0.84
SNHG1-215ENST00000540904 DENND5BQ6ZUT9 1274 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 HFE2Q6ZVN8 426 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 PAQR9Q6ZVX9 377 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 TMEM150AQ86TG1 271 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 IRF2BP1Q8IU81 584 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 TTC39CQ8N584 583 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 WHAMMQ8TF30 809 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 MRPS31Q92665 395 aaKnown RBP9.8□□□□□ -0.84
SNHG1-215ENST00000540904 PBXIP1Q96AQ6 731 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 ELSPBP1Q96BH3 223 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 ASIC4Q96FT7 647 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 TRMT2BQ96GJ1 504 aaKnown RBP9.8□□□□□ -0.84
SNHG1-215ENST00000540904 SMARCD1Q96GM5 515 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 C8orf48Q96LL4 319 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 MYRFLQ96LU7 910 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 HEXIM2Q96MH2 286 aaKnown RBP9.8□□□□□ -0.84
SNHG1-215ENST00000540904 NT5C1BQ96P26 610 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 KCNK16Q96T55 309 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 LRFN3Q9BTN0 628 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 PLA2G2FQ9BZM2 168 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 DNAI2Q9GZS0 605 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 THAP9Q9H5L6 903 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 TASP1Q9H6P5 420 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 DMAP1Q9NPF5 467 aaPredicted RBP9.8□□□□□ -0.84
SNHG1-215ENST00000540904 BDP1A6H8Y1 2624 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 NCOR1O75376 2440 aa9.8□□□□□ -0.84
SNHG1-215ENST00000540904 DOCK6Q96HP0 2047 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 ATMINO43313 823 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-215ENST00000540904 TADA3O75528 432 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 FAM200BP0CF97 657 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 TBXAS1P24557 533 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-215ENST00000540904 RAD23BP54727 409 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 MAP3K7CLP57077 242 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 USP46P62068 366 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 YWHAEP62258 255 aaKnown RBP9.79□□□□□ -0.84
SNHG1-215ENST00000540904 GPC5P78333 572 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 IFRD2Q12894 506 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-215ENST00000540904 GRM2Q14416 872 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 CT47A1Q5JQC4 288 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-215ENST00000540904 TXNDC8Q6A555 127 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 ASTLQ6HA08 431 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-215ENST00000540904 CAVIN1Q6NZI2 390 aaKnown RBP9.79□□□□□ -0.84
SNHG1-215ENST00000540904 RRAGAQ7L523 313 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 ARID3BQ8IVW6 561 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-215ENST00000540904 FAM114A1Q8IWE2 563 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 SIX5Q8N196 739 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 PPM1KQ8N3J5 372 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 MAB21L3Q8N8X9 362 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms